Detailed information of deep learning profile BP001240.1

This page shows detailed deep learning-derived predictions and motifs for IRF2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF2
Model ID: BP001240.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
JASPAR ID: MA0051.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14316  
Source: ENCSR645ZWR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.02 0.00 0.01 0.00 0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 -0.00 0.01 0.01 0.01 -0.00 -0.00 -0.00 0.02 0.02 0.01 -0.00 -0.00 -0.00 0.01 0.01 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 35 31 35 42 26 38 35 36 26 33 43 49 41 38 37 19 16 10 96 8 3 3 1 1 120 5 0 1 2 0 69 22 7 6 6 39 39 35 51 44 43 33 47 39 39 40 36 33 46 35 ]
C [ 71 64 58 63 74 62 59 54 56 61 50 59 62 47 67 48 38 63 16 109 7 17 12 173 0 126 1 0 1 164 28 81 13 13 42 70 52 51 45 41 47 57 59 55 53 47 55 59 49 54 ]
G [ 40 52 45 39 43 48 42 61 51 56 55 36 47 66 39 49 33 44 56 68 6 1 4 1 65 50 2 1 1 11 69 39 11 7 13 24 55 53 39 40 26 54 48 44 38 54 53 45 50 47 ]
T [ 44 43 52 46 47 42 54 39 57 40 42 46 40 39 47 74 103 73 22 5 174 169 173 15 5 9 187 188 186 15 24 48 159 164 129 57 44 51 55 65 74 46 36 52 60 49 46 53 45 54 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.01 -0.00 0.00 -0.00 -0.01 -0.00 -0.01 -0.01 0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.00 -0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.01 -0.01 0.02 -0.01 0.01 -0.01 -0.01 -0.01 0.02 -0.01 0.00 -0.01 -0.01 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.01 0.01 0.00 -0.00 -0.00 -0.01 -0.01 0.01 0.00 -0.00 -0.00 -0.01 -0.00 0.00 -0.00 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.01 -0.01 0.01 0.01 0.01 -0.00 -0.01 -0.01 0.02 0.02 0.01 -0.01 -0.01 -0.00 0.01 0.01 0.00 -0.01 -0.00 -0.00 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 189

1 profiles found for the same TF (IRF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001239.1 IRF2 ENCSR376WCJ K562 Homo sapiens MA0051.2
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