Detailed information of deep learning profile BP001223.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF189 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF189
Model ID: BP001223.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1725.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75820  
Source: ENCSR163RYW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.06 0.03 -0.00 0.01 -0.00 0.00 0.01 0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 0.01 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.05 0.06 0.00 -0.00 0.00 0.00 0.04 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 4853 5053 4065 4457 3781 3523 4358 3314 3031 3263 3227 4574 4165 2981 3824 5820 2818 5674 2519 63 5 14848 14089 947 10157 376 6204 8194 4068 3687 3240 2743 2769 5268 6389 6199 3918 3120 3433 3656 3331 3749 4179 5126 3454 3657 3299 4306 3986 3882 ]
C [ 3007 3152 3304 3086 3214 4069 3286 3300 3266 4553 4788 3762 2899 3319 4372 1875 4269 4339 420 7 5 77 210 10234 1329 240 6881 2813 1947 2707 2330 2831 6772 2395 2501 2884 2660 3087 5013 4195 4180 2950 2787 2976 3473 3290 4130 3560 3151 3108 ]
G [ 4484 4100 4848 4639 5316 4117 4446 4168 4002 3956 3858 3879 5166 6438 3362 5514 6279 3923 5511 14834 14914 0 28 3226 3274 13624 334 3491 4043 5603 4490 7439 3056 4606 3975 3845 6161 5969 3693 4026 4169 4848 5461 4199 5360 5165 4240 4206 4872 5049 ]
T [ 2583 2622 2710 2745 2616 3218 2837 4145 4628 3155 3054 2712 2697 2189 3369 1718 1561 991 6477 23 3 2 600 520 167 687 1508 429 4869 2930 4867 1914 2330 2658 2062 1999 2188 2751 2788 3050 3247 3380 2500 2626 2640 2815 3258 2855 2918 2888 ]

Hypothetical CWM

   
A [ 0.01 -0.00 0.01 -0.00 -0.02 -0.01 0.06 0.04 -0.01 0.02 -0.01 0.02 0.01 0.00 0.00 -0.00 -0.00 ]
C [ -0.00 0.01 0.01 0.00 -0.01 -0.02 0.01 -0.00 0.03 0.01 -0.01 0.02 0.01 0.00 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.05 0.06 -0.04 -0.03 0.01 0.01 0.04 -0.02 0.01 0.00 0.00 0.00 0.01 ]
T [ -0.01 -0.00 -0.01 0.01 -0.01 -0.02 -0.02 0.01 -0.01 -0.02 0.00 0.00 -0.02 0.01 0.00 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3190

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2641

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 942

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 237

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 79

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 29

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 21

CWM

PFM

     

HCWM