Detailed information of deep learning profile BP001223.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF189 in HEK293 using a single trained BPNet model.

Model details

Name: ZNF189
Model ID: BP001223.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1725.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O75820  
Source: ENCSR163RYW
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.04 0.00 0.00 -0.00 0.00 0.06 0.05 0.00 0.00 0.00 0.00 ]
G [ 0.00 -0.00 0.00 0.01 0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.01 0.00 -0.00 0.01 -0.00 0.03 0.06 -0.00 -0.00 -0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 2888 2918 2855 3258 2815 2640 2626 2500 3380 3247 3050 2788 2751 2188 1999 2062 2658 2330 1914 4867 2930 4869 429 1508 687 167 520 600 2 3 23 6477 991 1561 1718 3369 2189 2697 2712 3054 3155 4628 4145 2837 3218 2616 2745 2710 2622 2583 ]
C [ 5049 4872 4206 4240 5165 5360 4199 5461 4848 4169 4026 3693 5969 6161 3845 3975 4606 3056 7439 4490 5603 4043 3491 334 13624 3274 3226 28 0 14914 14834 5511 3923 6279 5514 3362 6438 5166 3879 3858 3956 4002 4168 4446 4117 5316 4639 4848 4100 4484 ]
G [ 3108 3151 3560 4130 3290 3473 2976 2787 2950 4180 4195 5013 3087 2660 2884 2501 2395 6772 2831 2330 2707 1947 2813 6881 240 1329 10234 210 77 5 7 420 4339 4269 1875 4372 3319 2899 3762 4788 4553 3266 3300 3286 4069 3214 3086 3304 3152 3007 ]
T [ 3882 3986 4306 3299 3657 3454 5126 4179 3749 3331 3656 3433 3120 3918 6199 6389 5268 2769 2743 3240 3687 4068 8194 6204 376 10157 947 14089 14848 5 63 2519 5674 2818 5820 3824 2981 4165 4574 3227 3263 3031 3314 4358 3523 3781 4457 4065 5053 4853 ]

Hypothetical CWM

   
A [ -0.00 0.00 0.00 0.01 -0.02 0.00 0.00 -0.02 -0.01 0.01 -0.02 -0.02 -0.01 0.01 -0.01 -0.00 -0.01 ]
C [ 0.01 0.00 0.00 0.00 0.01 -0.02 0.04 0.01 0.01 -0.03 -0.04 0.06 0.05 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.00 0.00 0.01 0.02 -0.01 0.01 0.03 -0.00 0.01 -0.02 -0.01 0.00 0.01 0.01 -0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.01 0.02 -0.01 0.02 -0.01 0.04 0.06 -0.01 -0.02 -0.00 0.01 -0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3190

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2641

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 942

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 237

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 79

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 37

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 29

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 21

CWM

PFM

     

HCWM