Detailed information of deep learning profile BP001220.1

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This page shows detailed deep learning-derived predictions and motifs for HES1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HES1
Model ID: BP001220.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
JASPAR ID: MA1099.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14469  
Source: ENCSR091JXL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 -0.00 0.03 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.04 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.02 0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 219 245 240 241 250 265 272 263 239 175 264 236 206 181 230 192 186 214 190 152 182 156 201 104 148 56 488 3 9 17 4 193 59 155 158 235 280 274 178 179 223 182 253 185 221 217 266 214 184 230 ]
C [ 321 328 351 342 358 336 311 331 341 347 322 296 328 378 366 297 344 360 337 364 410 446 320 161 179 1044 12 1092 1 73 1 453 676 304 336 246 292 229 335 386 361 327 324 332 358 315 329 365 324 336 ]
G [ 371 333 345 357 345 338 369 358 326 349 352 412 420 342 345 432 408 370 370 403 343 352 364 752 694 21 572 1 1117 5 1119 331 291 340 461 419 387 417 346 354 333 404 352 407 327 338 359 330 340 331 ]
T [ 217 222 192 188 175 189 176 176 222 257 190 184 174 227 187 207 190 184 231 209 193 174 243 111 107 7 56 32 1 1033 4 151 102 329 173 228 169 208 269 209 211 215 199 204 222 258 174 219 280 231 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.00 0.01 -0.01 -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.00 -0.00 0.02 -0.02 0.03 -0.03 0.01 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.02 -0.03 0.04 -0.02 0.02 -0.00 0.00 0.01 0.01 ]
T [ -0.00 0.00 -0.01 -0.00 -0.01 -0.00 0.00 -0.01 0.02 0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5832

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1260

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 744

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 24

CWM

PFM

     

HCWM

1 profiles found for the same TF (HES1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001221.1 HES1 ENCSR109ODF MCF-7 Homo sapiens MA1099.3
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