Detailed information of deep learning profile BP001220.1

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This page shows detailed deep learning-derived predictions and motifs for HES1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HES1
Model ID: BP001220.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
JASPAR ID: MA1099.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14469  
Source: ENCSR091JXL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 0.00 0.02 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.04 0.00 0.01 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.03 -0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 231 280 219 174 258 222 204 199 215 211 209 269 208 169 228 173 329 102 151 4 1033 1 32 56 7 107 111 243 174 193 209 231 184 190 207 187 227 174 184 190 257 222 176 176 189 175 188 192 222 217 ]
C [ 331 340 330 359 338 327 407 352 404 333 354 346 417 387 419 461 340 291 331 1119 5 1117 1 572 21 694 752 364 352 343 403 370 370 408 432 345 342 420 412 352 349 326 358 369 338 345 357 345 333 371 ]
G [ 336 324 365 329 315 358 332 324 327 361 386 335 229 292 246 336 304 676 453 1 73 1 1092 12 1044 179 161 320 446 410 364 337 360 344 297 366 378 328 296 322 347 341 331 311 336 358 342 351 328 321 ]
T [ 230 184 214 266 217 221 185 253 182 223 179 178 274 280 235 158 155 59 193 4 17 9 3 488 56 148 104 201 156 182 152 190 214 186 192 230 181 206 236 264 175 239 263 272 265 250 241 240 245 219 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.00 0.02 -0.01 0.00 -0.00 -0.01 -0.00 -0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.00 -0.00 0.02 -0.02 0.04 -0.03 0.02 -0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 0.01 -0.03 0.03 -0.02 0.02 -0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 -0.01 -0.00 -0.00 -0.01 0.01 0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5832

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1260

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 744

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 71

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 24

CWM

PFM

     

HCWM

1 profiles found for the same TF (HES1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001221.1 HES1 ENCSR109ODF MCF-7 Homo sapiens MA1099.3
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