Detailed information of deep learning profile BP001215.1

  1. Home
  2. Deep Learning Profile > BP001215.1
This page shows detailed deep learning-derived predictions and motifs for HIC2 in HepG2 using a single trained BPNet model.

Model details

Name: HIC2
Model ID: BP001215.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA0738.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96JB3  
Source: ENCSR015LYB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.02 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.03 0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 772 732 769 795 791 794 774 733 746 778 782 673 734 751 715 694 686 658 569 1067 904 469 474 4 0 0 0 3751 192 1120 769 939 567 635 758 655 720 742 837 743 696 730 773 765 767 843 777 766 763 790 ]
C [ 1090 1110 1134 1092 1112 1067 1095 1099 1104 1095 1046 1134 1196 1028 1059 1196 1290 1106 1389 963 897 1633 1805 3 0 3 3769 4 2226 1033 751 940 1139 1255 1124 1156 1137 1239 984 1139 1148 1146 1111 1110 1144 1149 1187 1089 1142 1111 ]
G [ 1132 1134 1077 1075 1099 1156 1243 1195 1194 1090 1192 1164 1076 1231 1214 1290 1151 1257 1246 1084 1571 1543 397 1464 3768 3769 1 18 695 798 1778 1228 1368 1051 1237 1251 1259 1109 1203 1186 1106 1117 1079 1175 1075 1057 1053 1094 1094 1104 ]
T [ 780 798 794 812 772 757 662 747 730 811 754 803 768 764 786 594 647 753 570 660 402 129 1098 2303 6 2 4 1 661 823 476 667 700 833 655 712 658 684 750 706 824 781 811 724 788 725 757 825 775 769 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 -0.00 -0.00 -0.01 -0.02 -0.02 -0.02 -0.02 0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 0.01 -0.01 -0.01 -0.00 0.03 -0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.01 0.03 0.02 -0.02 0.01 0.00 0.00 0.01 0.01 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 0.01 -0.01 -0.01 -0.01 -0.03 -0.00 -0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4061

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1649

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 386

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 355

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 249

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 207

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 176

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 31

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 22

CWM

PFM

     

HCWM