Detailed information of deep learning profile BP001215.1

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This page shows detailed deep learning-derived predictions and motifs for HIC2 in HepG2 using a single trained BPNet model.

Model details

Name: HIC2
Model ID: BP001215.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
JASPAR ID: MA0738.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96JB3  
Source: ENCSR015LYB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.03 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 769 775 825 757 725 788 724 811 781 824 706 750 684 658 712 655 833 700 667 476 823 661 1 4 2 6 2303 1098 129 402 660 570 753 647 594 786 764 768 803 754 811 730 747 662 757 772 812 794 798 780 ]
C [ 1104 1094 1094 1053 1057 1075 1175 1079 1117 1106 1186 1203 1109 1259 1251 1237 1051 1368 1228 1778 798 695 18 1 3769 3768 1464 397 1543 1571 1084 1246 1257 1151 1290 1214 1231 1076 1164 1192 1090 1194 1195 1243 1156 1099 1075 1077 1134 1132 ]
G [ 1111 1142 1089 1187 1149 1144 1110 1111 1146 1148 1139 984 1239 1137 1156 1124 1255 1139 940 751 1033 2226 4 3769 3 0 3 1805 1633 897 963 1389 1106 1290 1196 1059 1028 1196 1134 1046 1095 1104 1099 1095 1067 1112 1092 1134 1110 1090 ]
T [ 790 763 766 777 843 767 765 773 730 696 743 837 742 720 655 758 635 567 939 769 1120 192 3751 0 0 0 4 474 469 904 1067 569 658 686 694 715 751 734 673 782 778 746 733 774 794 791 795 769 732 772 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 -0.00 -0.03 -0.01 -0.01 -0.01 0.01 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.01 0.01 0.00 0.00 0.01 -0.02 0.02 0.03 0.01 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.01 0.03 -0.00 -0.01 -0.01 0.01 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 0.02 -0.02 -0.02 -0.02 -0.02 -0.01 -0.00 -0.00 -0.00 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4061

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1649

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 386

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 355

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 249

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 207

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 176

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 91

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 31

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 22

CWM

PFM

     

HCWM