Detailed information of deep learning profile BP001210.1

  1. Home
  2. Deep Learning Profile > BP001210.1
This page shows detailed deep learning-derived predictions and motifs for HMBOX1 in K562 using a single trained BPNet model.

Model details

Name: HMBOX1
Model ID: BP001210.1
Cell line/tissue: K562
Class: Homeo domain factors
Family: POU domain factors
JASPAR ID: MA0895.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q6NT76  
Source: ENCSR757IIU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.04 0.01 -0.00 -0.00 0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.05 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 0.04 0.03 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 2111 2181 2163 2138 2245 2145 2175 2042 2143 2170 2157 2170 2158 2140 2077 2150 2160 2283 2200 1922 2591 2307 861 1192 2495 101 31 509 7687 3743 890 2429 1981 1837 2159 2138 2155 2153 2281 2195 2153 2206 2183 2139 2081 2084 2033 2111 2119 2179 ]
C [ 1815 1705 1679 1732 1649 1678 1738 1905 1721 1770 1714 1749 1780 1662 1605 1488 1528 1667 1605 1615 1331 1859 3611 748 93 49 13 222 9 1037 4925 1590 1679 1716 1470 1636 1691 1824 1755 1930 1958 1827 1840 1764 1710 1802 1810 1788 1825 1728 ]
G [ 1806 1863 1768 1842 1886 1906 1807 1764 1864 1883 1861 1791 1852 1960 2055 2016 2085 1885 1920 2203 1825 1909 1559 644 5008 7678 0 51 53 1226 1337 1126 2300 1797 1850 1871 1743 1640 1735 1708 1716 1783 1832 1857 1891 1795 1858 1720 1802 1758 ]
T [ 2175 2158 2297 2195 2127 2178 2187 2196 2179 2084 2175 2197 2117 2145 2170 2253 2134 2072 2182 2167 2160 1832 1876 5323 311 79 7863 7125 158 1901 755 2762 1947 2557 2428 2262 2318 2290 2136 2074 2080 2091 2052 2147 2225 2226 2206 2288 2161 2242 ]

Hypothetical CWM

   
A [ -0.00 -0.01 0.00 0.00 -0.02 -0.01 0.02 -0.01 -0.03 -0.01 0.04 0.01 -0.02 -0.01 -0.00 -0.01 -0.00 ]
C [ 0.01 0.01 -0.00 0.00 0.02 0.00 -0.01 -0.01 -0.00 -0.01 -0.03 -0.01 0.03 0.01 0.01 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.01 0.00 -0.00 0.02 0.05 -0.03 -0.03 -0.00 0.00 0.00 0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.01 -0.01 0.00 0.02 -0.03 -0.02 0.04 0.03 -0.02 -0.01 -0.01 0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 9231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 6578

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 4538

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 3443

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 184

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 111

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 102

CWM

PFM

     

HCWM