Detailed information of deep learning profile BP001209.1

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This page shows detailed deep learning-derived predictions and motifs for OSR2 in HEK293 using a single trained BPNet model.

Model details

Name: OSR2
Model ID: BP001209.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1646.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q8N2R0  
Source: ENCSR324LTM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 -0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1710 1675 1723 1681 1656 1688 1727 1651 1771 1716 1596 1796 1578 1688 1817 1550 1560 1758 1569 881 2455 370 1 11 4139 2 10 284 1009 1858 1656 1779 1608 1639 1530 1724 1625 1682 1666 1706 1556 1668 1713 1667 1729 1685 1684 1706 1716 1636 ]
C [ 1642 1790 1609 1791 1859 1779 1641 1940 1667 1650 1921 1532 1806 1984 1488 1655 2182 1688 1652 2974 351 151 6980 247 788 6976 1551 19 1495 935 1234 1979 1748 1468 2062 1697 1650 2090 1584 1494 1936 1770 1607 1874 1597 1615 1882 1670 1610 1858 ]
G [ 1824 1725 1737 1768 1668 1618 1843 1739 1680 1831 1593 1664 1858 1532 1727 2089 1345 1561 2051 1340 1621 6456 0 0 404 1 3 6301 1802 1725 1902 1700 1530 2239 1618 1578 2026 1597 1741 2075 1672 1705 1942 1704 1693 1916 1616 1691 1831 1716 ]
T [ 1805 1791 1912 1741 1798 1896 1770 1651 1863 1784 1871 1989 1739 1777 1949 1687 1894 1974 1709 1786 2554 4 0 6723 1650 2 5417 377 2675 2463 2189 1523 2095 1635 1771 1982 1680 1612 1990 1706 1817 1838 1719 1736 1962 1765 1799 1914 1824 1771 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.00 0.01 -0.01 -0.01 0.02 0.00 -0.02 0.00 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 0.03 0.00 -0.00 0.03 0.02 -0.01 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.02 -0.02 -0.02 -0.01 -0.02 -0.02 0.02 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.02 0.00 0.03 0.00 -0.02 0.02 0.00 0.01 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4280

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2799

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2380

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2192

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 2109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1833

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 627

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 234

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 119

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 23

CWM

PFM

     

HCWM