Detailed information of deep learning profile BP001199.1

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This page shows detailed deep learning-derived predictions and motifs for TFAP2B in SK-N-SH using a single trained BPNet model.

Model details

Name: TFAP2B
Model ID: BP001199.1
Cell line/tissue: SK-N-SH
Class: Basic helix-span-helix factors (bHSH)
Family: AP-2
JASPAR ID: MA0811.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q92481  
Source: ENCSR630GGD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 -0.00 -0.00 0.01 0.00 0.00 ]
C [ 0.00 -0.00 0.00 0.00 0.01 0.12 0.10 0.01 0.01 0.00 0.00 0.00 0.01 0.02 0.00 -0.00 -0.00 ]
G [ -0.00 0.00 -0.00 0.01 0.04 -0.00 0.00 0.00 0.01 0.01 0.08 0.12 0.04 0.00 0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.01 -0.00 -0.00 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 6081 6001 6257 6055 6117 6233 6100 6158 6184 6112 6190 6147 6161 6132 6377 7654 6693 9563 4264 6631 337 0 0 868 2208 13639 4345 17 596 3064 12815 5231 7720 5618 6075 5360 5888 6004 6033 5948 5799 5879 6090 5984 5811 5942 6098 6076 6355 6018 ]
C [ 5840 6069 5920 6065 6027 5859 6049 5969 5984 5864 6098 6194 6280 6360 6130 5602 6164 4355 5381 3524 4578 23945 22711 6512 10013 2475 1 1 6594 13928 3443 5042 4143 4896 5314 5707 5739 5575 5518 5729 5962 6031 5959 5675 5757 5608 5802 5731 5820 5845 ]
G [ 5838 5804 5772 5868 5872 5890 5922 5965 5999 5968 5588 5637 5629 6069 5864 5125 4259 4943 4084 5467 18365 1 1 1264 9463 6639 19553 23928 16391 3258 3561 4916 5951 5938 6417 6606 6608 6257 6615 6321 6055 6038 6013 6234 6298 6255 6209 6185 5982 6054 ]
T [ 6188 6073 5998 5959 5931 5965 5876 5855 5780 6003 6071 5969 5877 5386 5576 5566 6831 5086 10218 8325 667 1 1235 15303 2263 1194 48 1 366 3697 4128 8758 6133 7495 6141 6274 5712 6111 5781 5949 6131 5999 5885 6054 6081 6142 5838 5955 5790 6030 ]

Hypothetical CWM

   
A [ 0.00 0.01 -0.00 -0.00 -0.03 -0.07 -0.10 -0.05 -0.02 0.02 0.03 -0.02 -0.03 -0.01 0.02 0.00 0.01 ]
C [ 0.00 -0.00 0.01 0.02 0.04 0.12 0.11 0.04 0.03 0.02 -0.04 -0.05 0.03 0.03 -0.01 0.00 -0.00 ]
G [ -0.00 0.00 -0.00 0.01 0.05 -0.04 -0.05 0.01 0.03 0.03 0.09 0.12 0.06 0.01 0.01 -0.00 0.00 ]
T [ 0.01 0.00 0.02 -0.00 -0.03 -0.03 0.03 0.02 -0.01 -0.05 -0.10 -0.07 -0.04 -0.01 -0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4093

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2558

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2132

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1981

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 493

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 423

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 342

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 70

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 43

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 32

CWM

PFM

     

HCWM