Detailed information of deep learning profile BP001193.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF707 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF707
Model ID: BP001193.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1715.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96C28  
Source: ENCSR017XHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.01 0.00 0.04 0.00 -0.00 0.00 -0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.04 0.00 -0.00 0.03 0.02 0.00 -0.00 0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.06 0.06 0.07 0.04 -0.00 0.08 -0.00 0.06 0.05 0.00 0.00 -0.00 -0.00 -0.00 0.04 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.06 0.08 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.07 0.00 -0.00 0.03 0.00 0.00 0.04 -0.00 -0.00 0.00 0.00 0.00 0.01 0.02 -0.01 -0.00 ]

Frequency matrix

       
A [ 118 403 106 106 98 108 109 295 132 487 111 130 504 301 114 598 31 26 18 64 637 23 33 10 23 24 44 47 64 636 72 87 566 572 153 100 106 390 129 96 164 144 417 118 138 449 114 100 119 106 ]
C [ 110 99 131 409 143 102 103 102 334 121 105 389 85 82 468 46 674 732 726 594 24 677 14 629 668 121 10 8 57 76 604 514 28 27 60 55 111 147 421 103 97 98 105 110 102 88 103 128 371 323 ]
G [ 123 126 87 98 119 78 88 95 100 94 445 107 117 322 42 78 12 18 18 44 110 28 19 10 11 36 678 718 35 27 72 27 93 96 61 65 77 77 106 143 381 98 114 81 104 135 431 101 108 104 ]
T [ 441 164 468 179 432 504 492 300 226 90 131 166 86 87 168 70 75 16 30 90 21 64 726 143 90 611 60 19 636 53 44 164 105 97 518 572 498 178 136 450 150 452 156 483 448 120 144 463 194 259 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.02 0.02 0.04 -0.01 -0.02 -0.02 -0.01 0.04 -0.02 -0.03 -0.02 -0.00 -0.04 -0.01 0.02 0.00 0.04 0.01 0.00 0.03 0.03 0.02 -0.01 0.01 -0.00 ]
C [ 0.01 -0.00 -0.00 -0.01 0.03 -0.02 0.06 0.06 0.07 0.05 -0.00 0.08 -0.02 0.07 0.06 0.04 -0.02 -0.04 -0.01 0.01 0.04 0.01 -0.03 -0.03 -0.01 -0.00 0.01 0.01 ]
G [ -0.00 0.01 0.01 0.00 -0.02 -0.00 -0.04 -0.00 -0.00 0.01 0.06 -0.02 0.02 -0.03 -0.01 -0.00 0.06 0.08 -0.01 -0.01 0.02 -0.02 0.01 0.01 0.00 0.00 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.01 -0.01 -0.01 0.01 -0.02 -0.02 -0.00 -0.05 0.00 0.07 0.02 0.00 0.04 0.02 -0.01 0.05 -0.00 -0.03 0.03 0.01 0.01 0.01 0.02 -0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1092

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 973

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 511

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 79

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF707) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001194.1 ZNF707 ENCSR077TKJ K562 Homo sapiens MA1715.1
BP001195.1 ZNF707 ENCSR854IPI HEK293 Homo sapiens MA1715.1
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