Detailed information of deep learning profile BP001193.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF707 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF707
Model ID: BP001193.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1715.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q96C28  
Source: ENCSR017XHZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.01 0.02 0.01 0.00 0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 0.03 -0.00 0.00 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.08 0.06 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 ]
G [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.01 0.04 -0.00 -0.00 -0.00 0.00 0.00 0.05 0.06 -0.00 0.08 -0.00 0.04 0.07 0.06 0.06 -0.00 0.02 -0.00 -0.00 -0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 0.02 0.03 -0.00 0.00 0.04 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.04 -0.00 0.00 -0.00 0.00 0.04 0.00 0.01 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 259 194 463 144 120 448 483 156 452 150 450 136 178 498 572 518 97 105 164 44 53 636 19 60 611 90 143 726 64 21 90 30 16 75 70 168 87 86 166 131 90 226 300 492 504 432 179 468 164 441 ]
C [ 104 108 101 431 135 104 81 114 98 381 143 106 77 77 65 61 96 93 27 72 27 35 718 678 36 11 10 19 28 110 44 18 18 12 78 42 322 117 107 445 94 100 95 88 78 119 98 87 126 123 ]
G [ 323 371 128 103 88 102 110 105 98 97 103 421 147 111 55 60 27 28 514 604 76 57 8 10 121 668 629 14 677 24 594 726 732 674 46 468 82 85 389 105 121 334 102 103 102 143 409 131 99 110 ]
T [ 106 119 100 114 449 138 118 417 144 164 96 129 390 106 100 153 572 566 87 72 636 64 47 44 24 23 10 33 23 637 64 18 26 31 598 114 301 504 130 111 487 132 295 109 108 98 106 106 403 118 ]

Hypothetical CWM

   
A [ 0.00 -0.01 0.02 0.01 0.01 0.01 0.03 -0.03 -0.00 0.05 -0.01 0.02 0.04 0.00 0.02 0.07 0.00 -0.05 -0.00 -0.02 -0.02 0.01 -0.01 -0.01 0.01 0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.00 0.01 0.01 -0.02 0.02 -0.01 -0.01 0.08 0.06 -0.00 -0.01 -0.03 0.02 -0.02 0.06 0.01 -0.00 -0.00 -0.04 -0.00 -0.02 0.00 0.01 0.01 -0.00 ]
G [ 0.01 0.01 -0.00 -0.01 -0.03 -0.03 0.01 0.04 0.01 -0.01 -0.04 -0.02 0.04 0.06 0.07 -0.02 0.08 -0.00 0.05 0.07 0.06 0.06 -0.02 0.03 -0.01 -0.00 -0.00 0.01 ]
T [ -0.00 0.01 -0.01 0.02 0.03 0.03 0.00 0.01 0.04 0.00 0.02 -0.01 -0.04 -0.00 -0.02 -0.03 -0.02 0.04 -0.01 -0.02 -0.02 -0.01 0.04 0.02 0.02 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 1092

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 973

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 511

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 156

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 79

CWM

PFM

     

HCWM

2 profiles found for the same TF (ZNF707) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001194.1 ZNF707 ENCSR077TKJ K562 Homo sapiens MA1715.1
BP001195.1 ZNF707 ENCSR854IPI HEK293 Homo sapiens MA1715.1
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