Detailed information of deep learning profile BP001186.1

This page shows detailed deep learning-derived predictions and motifs for FOXS1 in A549 using a single trained BPNet model.

Model details

Name: FOXS1
Model ID: BP001186.1
Cell line/tissue: A549
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA2118.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O43638  
Source: ENCSR326AQV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 0.00 0.01 -0.00 0.01 0.01 0.01 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

A [ 421 389 398 408 415 416 353 433 403 441 368 422 440 399 368 329 342 368 426 32 223 19 7 63 1169 39 547 108 679 564 211 321 575 362 355 393 468 397 417 392 533 439 394 450 440 444 418 422 420 401 ]
C [ 338 371 366 344 355 332 352 326 421 348 408 348 371 379 361 336 507 432 341 18 6 25 11 9 48 889 277 348 69 110 386 543 323 416 356 417 349 386 456 482 348 342 369 355 362 302 381 329 356 377 ]
G [ 312 364 365 350 346 349 369 353 334 334 333 320 317 316 402 430 343 360 290 21 1331 26 24 264 117 40 86 62 48 726 612 414 285 388 337 356 339 400 260 292 317 371 373 317 333 359 332 346 346 331 ]
T [ 495 442 437 464 450 469 492 454 408 443 457 476 438 472 435 471 374 406 509 1495 6 1496 1524 1230 232 598 656 1048 770 166 357 288 383 400 518 400 410 383 433 400 368 414 430 444 431 461 435 469 444 457 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.01 0.00 -0.01 -0.01 -0.00 0.01 -0.01 0.00 -0.01 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ -0.00 0.00 0.00 0.00 -0.00 -0.01 -0.00 -0.01 -0.01 -0.01 0.01 -0.00 0.00 -0.01 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.01 0.01 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.01 -0.01 0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.01 -0.01 0.01 0.01 0.01 -0.00 0.00 0.00 0.01 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1076

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 231

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 106

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 62