Detailed information of deep learning profile BP001186.1

This page shows detailed deep learning-derived predictions and motifs for FOXS1 in A549 using a single trained BPNet model.

Model details

Name: FOXS1
Model ID: BP001186.1
Cell line/tissue: A549
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA2118.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O43638  
Source: ENCSR326AQV
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.01 0.01 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 457 444 469 435 461 431 444 430 414 368 400 433 383 410 400 518 400 383 288 357 166 770 1048 656 598 232 1230 1524 1496 6 1495 509 406 374 471 435 472 438 476 457 443 408 454 492 469 450 464 437 442 495 ]
C [ 331 346 346 332 359 333 317 373 371 317 292 260 400 339 356 337 388 285 414 612 726 48 62 86 40 117 264 24 26 1331 21 290 360 343 430 402 316 317 320 333 334 334 353 369 349 346 350 365 364 312 ]
G [ 377 356 329 381 302 362 355 369 342 348 482 456 386 349 417 356 416 323 543 386 110 69 348 277 889 48 9 11 25 6 18 341 432 507 336 361 379 371 348 408 348 421 326 352 332 355 344 366 371 338 ]
T [ 401 420 422 418 444 440 450 394 439 533 392 417 397 468 393 355 362 575 321 211 564 679 108 547 39 1169 63 7 19 223 32 426 368 342 329 368 399 440 422 368 441 403 433 353 416 415 408 398 389 421 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 0.00 0.01 0.00 0.00 -0.00 0.01 0.01 0.01 -0.01 0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.00 -0.01 -0.01 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.01 0.00 -0.00 0.01 -0.01 -0.01 -0.01 -0.00 -0.01 -0.00 0.00 0.00 0.00 -0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.01 0.00 -0.01 0.01 -0.00 -0.01 -0.01 0.00 -0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1076

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 231

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 173

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 121

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 106

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 62