Detailed information of deep learning profile BP001157.1

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This page shows detailed deep learning-derived predictions and motifs for ADNP in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ADNP
Model ID: BP001157.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: UN0305.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9H2P0  
Source: ENCSR981BHT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 0.01 0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.01 0.01 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 -0.00 -0.00 -0.00 0.02 0.03 0.02 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.02 -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00 0.03 0.00 -0.00 0.01 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.01 0.01 0.00 -0.00 -0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 0.02 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 350 292 313 359 263 248 443 232 159 535 285 111 577 192 200 14 3 5 1178 21 14 32 32 980 27 1114 10 1047 56 172 738 197 454 1080 910 1024 67 78 138 1076 116 130 70 219 152 714 301 681 336 645 ]
C [ 202 264 239 209 328 280 221 287 374 241 234 308 183 190 426 1101 1231 1226 22 95 37 63 310 93 1070 11 4 54 128 57 44 44 120 73 122 57 926 153 28 18 37 85 906 400 713 152 119 122 113 163 ]
G [ 501 418 343 432 382 272 316 234 194 218 183 133 316 250 272 21 0 1 37 16 8 103 49 124 38 85 1229 123 98 963 405 962 618 59 179 141 88 92 1040 131 1073 963 103 74 163 269 758 342 690 306 ]
T [ 194 273 352 247 274 447 267 494 520 253 545 695 171 615 349 111 13 15 10 1115 1188 1049 856 50 112 37 4 23 965 55 60 44 55 35 36 25 166 924 41 22 21 69 168 554 219 112 69 102 108 133 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.01 -0.01 -0.01 0.02 -0.01 -0.01 0.00 0.00 0.01 -0.00 0.01 0.00 0.02 -0.00 -0.00 0.00 -0.00 0.01 0.01 0.01 0.02 0.00 -0.01 -0.00 0.01 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.02 0.03 0.02 -0.01 0.00 0.00 -0.00 0.01 0.01 0.02 0.00 -0.00 0.00 0.01 0.01 0.00 0.00 0.01 0.00 0.00 -0.00 0.01 0.01 -0.01 -0.00 -0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.01 -0.00 0.00 0.01 0.00 -0.01 0.01 0.00 0.01 0.00 0.01 0.03 0.01 0.00 0.01 0.02 0.01 -0.00 0.00 0.01 0.00 -0.00 -0.00 0.01 0.01 0.01 0.01 -0.00 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 0.02 0.02 0.01 0.01 0.00 0.00 -0.00 -0.01 -0.01 0.01 0.00 -0.00 0.00 0.00 0.00 -0.01 -0.01 0.00 0.01 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 226

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 151

CWM

PFM

     

HCWM

1 profiles found for the same TF (ADNP) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001156.1 ADNP ENCSR440VKE K562 Homo sapiens UN0305.2
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