Detailed information of deep learning profile BP001146.1

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This page shows detailed deep learning-derived predictions and motifs for FOXK1 in WTC11 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXK1
Model ID: BP001146.1
Cell line/tissue: WTC11
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0852.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P85037  
Source: ENCSR352RXE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.03 -0.00 0.04 0.04 0.03 -0.00 0.00 -0.00 0.01 0.00 -0.00 ]

Frequency matrix

       
A [ 851 437 435 412 917 427 423 426 425 434 923 492 442 397 450 439 443 452 488 377 402 387 368 289 240 281 51 61 9 5 55 2197 15 815 391 895 705 409 448 973 913 456 448 478 500 489 613 554 448 816 ]
C [ 601 1094 1091 1127 630 597 618 557 922 659 595 591 1064 646 545 1104 1109 890 613 616 1026 709 603 1183 683 519 19 0 6 2 1 131 2196 867 523 540 738 602 991 642 596 623 977 951 598 677 644 567 1078 641 ]
G [ 643 538 557 575 550 1060 570 599 631 965 558 1016 584 538 528 541 568 556 953 1115 591 654 1099 580 568 414 8 2499 2 1 247 49 32 378 392 354 613 790 670 545 599 1065 637 621 611 885 825 977 573 611 ]
T [ 470 496 482 451 468 481 954 983 587 507 489 466 475 984 1042 481 445 667 511 457 546 815 495 513 1074 1351 2487 5 2548 2557 2262 188 322 505 1259 776 509 764 456 405 457 421 503 515 856 514 483 467 466 497 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.01 -0.01 0.02 -0.02 -0.01 -0.01 0.03 -0.02 0.00 -0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.00 -0.03 -0.01 -0.02 -0.04 -0.01 0.03 -0.00 0.00 0.00 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.02 0.04 -0.02 -0.01 0.01 -0.01 -0.01 0.01 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.03 -0.02 0.04 0.04 0.03 -0.00 0.00 -0.01 0.01 0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1282

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1028

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1021

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 603

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 516

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 442

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 438

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 414

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 334

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 333

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 267

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 192

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 68

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 24

CWM

PFM

     

HCWM

1 profiles found for the same TF (FOXK1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001147.1 FOXK1 ENCSR603BJQ HepG2 Homo sapiens MA0852.3
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