Detailed information of deep learning profile BP001144.1

  1. Home
  2. Deep Learning Profile > BP001144.1
This page shows detailed deep learning-derived predictions and motifs for ETV5 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETV5
Model ID: BP001144.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0765.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P41161  
Source: ENCSR096IIB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.05 0.03 0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.03 0.04 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.07 0.00 -0.00 0.02 -0.00 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.01 -0.00 -0.00 ]

Frequency matrix

       
A [ 3220 3268 3253 3232 3256 3297 3235 3170 3154 3234 3146 3291 3238 3162 3279 3195 3018 3158 2938 4249 3885 6024 581 5822 1 4 14269 12531 2721 1083 3302 3976 3188 2926 2915 3132 3103 3084 3139 3411 3093 3116 3189 3152 3254 3260 3112 3162 3222 3214 ]
C [ 3975 3934 3958 4031 4031 3938 3933 4112 4024 3917 3955 3973 4096 4187 4086 4128 4438 4329 4176 3510 3653 2370 11720 8496 1 39 78 115 879 4012 2504 3518 4520 3661 3992 3941 3435 3845 4100 3763 4100 3921 3862 3806 3853 3897 3921 4034 3868 3956 ]
G [ 4181 4145 4150 4169 4211 4156 4226 4220 4142 4113 4272 4091 4156 4090 4058 4356 4204 4218 4854 4193 4786 4256 1950 54 14387 14338 21 106 10687 1530 6022 4951 4299 4510 4494 4253 4624 4402 4282 4214 4239 4285 4334 4383 4300 4219 4400 4102 4197 4218 ]
T [ 3013 3042 3028 2957 2891 2998 2995 2887 3069 3125 3016 3034 2899 2950 2966 2710 2729 2684 2421 2437 2065 1739 138 17 0 8 21 1637 102 7764 2561 1944 2382 3292 2988 3063 3227 3058 2868 3001 2957 3067 3004 3048 2982 3013 2956 3091 3102 3001 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.01 -0.01 0.00 -0.04 -0.02 0.05 0.03 0.01 -0.02 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.04 0.06 -0.01 -0.01 -0.01 -0.01 -0.00 0.02 0.00 0.01 0.01 0.01 ]
G [ 0.01 0.00 0.01 0.01 0.01 -0.00 0.09 0.07 -0.02 -0.02 0.03 -0.00 0.01 0.01 0.01 0.01 ]
T [ -0.01 -0.00 -0.01 -0.01 -0.02 -0.05 -0.04 -0.02 -0.01 0.01 -0.03 0.02 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3449

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1482

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1009

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 933

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 657

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 284

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 144

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 30

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 27

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 21

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 20

CWM

PFM

     

HCWM

1 profiles found for the same TF (ETV5) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001145.1 ETV5 ENCSR971EWR K562 Homo sapiens MA0765.4
Showing 1 profiles of page 1 from 1 pages
  • 1 (current)