Detailed information of deep learning profile BP001143.1

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This page shows detailed deep learning-derived predictions and motifs for SCRT1 in HEK293 using a single trained BPNet model.

Model details

Name: SCRT1
Model ID: BP001143.1
Cell line/tissue: HEK293
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA0743.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9BWW7  
Source: ENCSR605MGM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 -0.00 0.02 0.06 0.00 0.05 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 -0.00 0.00 -0.00 0.04 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 0.03 0.06 -0.00 0.01 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5406 5394 6581 5662 5791 5671 5643 5829 5765 5628 6373 7077 6194 5143 6699 5724 5022 5931 5266 7536 7749 2205 814 14091 20124 1 20961 3523 386 333 2594 3318 3832 5431 5097 5397 5228 6224 5267 5751 6149 5450 5224 4831 5430 5473 5580 5475 5286 5601 ]
C [ 4764 5796 4906 4836 5993 5687 4450 5840 5666 5778 4752 4493 4541 5343 4893 4465 6931 4875 5032 3971 2515 2637 18119 3641 24 21279 56 126 225 1060 1848 4078 5699 5377 4690 6246 5975 4602 5814 5268 4802 5294 4908 6016 5748 5241 4995 4619 5713 5050 ]
G [ 4957 5272 5190 6078 4664 4950 4979 4794 4771 4849 5513 4822 5722 5150 4526 6480 4908 4963 6529 6608 5045 9679 537 985 843 0 6 17322 20174 333 13107 8167 6009 3807 7089 5096 5314 5975 5659 5252 5320 4966 6012 5380 5161 5128 5841 6401 5472 4884 ]
T [ 6155 4820 4605 4706 4834 4974 6210 4819 5080 5027 4644 4890 4825 5646 5164 4613 4421 5513 4455 3167 5973 6761 1812 2565 291 2 259 311 497 19556 3733 5719 5742 6667 4406 4543 4765 4481 4542 5011 5011 5572 5138 5055 4943 5440 4866 4787 4811 5747 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.01 -0.01 -0.02 0.03 0.06 -0.02 0.05 0.02 -0.01 -0.02 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.01 -0.00 0.00 -0.01 0.05 -0.01 -0.04 0.09 -0.00 -0.01 -0.02 0.01 -0.00 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.01 -0.00 0.02 -0.02 0.00 -0.00 -0.03 -0.04 0.04 0.06 -0.03 0.02 0.02 -0.00 -0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.01 0.01 -0.01 -0.01 -0.01 0.00 -0.02 -0.00 0.06 0.01 0.00 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 602

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 279

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 154

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM