Detailed information of deep learning profile BP001129.1

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This page shows detailed deep learning-derived predictions and motifs for VEZF1 in K562 using a single trained BPNet model.

Model details

Name: VEZF1
Model ID: BP001129.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1578.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14119  
Source: ENCSR189YMA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.01 0.01 0.01 0.01 0.02 0.03 0.04 0.04 0.02 0.03 0.03 0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2454 2446 2496 2378 2357 2403 2381 2317 2408 2335 2238 2185 2134 2111 2031 2058 1968 2029 1958 1948 1713 2299 1550 536 264 25 24 1243 260 16 1201 1234 1632 2049 1880 1987 2067 2230 2267 2255 2300 2408 2319 2438 2538 2436 2484 2534 2521 2489 ]
C [ 4875 4951 4911 4985 5018 5099 5142 5077 5226 5246 5266 5389 5364 5557 5755 5811 6215 6194 6430 6444 7019 5427 5988 11161 12398 13719 13618 6993 13257 13804 7507 7288 7178 5805 5926 5868 5588 5369 5423 5096 5139 5171 4961 4870 4914 4930 4963 4942 4879 4964 ]
G [ 3741 3799 3689 3647 3776 3615 3568 3658 3487 3578 3669 3541 3675 3606 3496 3529 3431 3265 3230 3085 2454 3530 4996 925 353 49 55 2453 199 23 1611 2022 2232 2465 2995 3285 3418 3513 3454 3433 3502 3575 3782 3687 3526 3640 3572 3461 3600 3572 ]
T [ 2817 2691 2791 2877 2736 2770 2796 2835 2766 2728 2714 2772 2714 2613 2605 2489 2273 2399 2269 2410 2701 2631 1353 1265 872 94 190 3198 171 44 3568 3343 2845 3568 3086 2747 2814 2775 2743 3103 2946 2733 2825 2892 2909 2881 2868 2950 2887 2862 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.02 -0.02 -0.02 -0.03 -0.02 -0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.01 0.02 0.03 0.03 0.04 0.04 0.04 0.03 0.03 0.02 0.02 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.01 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4482

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1746

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1070

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 24

CWM

PFM

     

HCWM