Detailed information of deep learning profile BP001129.1

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This page shows detailed deep learning-derived predictions and motifs for VEZF1 in K562 using a single trained BPNet model.

Model details

Name: VEZF1
Model ID: BP001129.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA1578.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14119  
Source: ENCSR189YMA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 0.03 0.03 0.02 0.04 0.04 0.03 0.02 0.01 0.01 0.01 0.01 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2862 2887 2950 2868 2881 2909 2892 2825 2733 2946 3103 2743 2775 2814 2747 3086 3568 2845 3343 3568 44 171 3198 190 94 872 1265 1353 2631 2701 2410 2269 2399 2273 2489 2605 2613 2714 2772 2714 2728 2766 2835 2796 2770 2736 2877 2791 2691 2817 ]
C [ 3572 3600 3461 3572 3640 3526 3687 3782 3575 3502 3433 3454 3513 3418 3285 2995 2465 2232 2022 1611 23 199 2453 55 49 353 925 4996 3530 2454 3085 3230 3265 3431 3529 3496 3606 3675 3541 3669 3578 3487 3658 3568 3615 3776 3647 3689 3799 3741 ]
G [ 4964 4879 4942 4963 4930 4914 4870 4961 5171 5139 5096 5423 5369 5588 5868 5926 5805 7178 7288 7507 13804 13257 6993 13618 13719 12398 11161 5988 5427 7019 6444 6430 6194 6215 5811 5755 5557 5364 5389 5266 5246 5226 5077 5142 5099 5018 4985 4911 4951 4875 ]
T [ 2489 2521 2534 2484 2436 2538 2438 2319 2408 2300 2255 2267 2230 2067 1987 1880 2049 1632 1234 1201 16 260 1243 24 25 264 536 1550 2299 1713 1948 1958 2029 1968 2058 2031 2111 2134 2185 2238 2335 2408 2317 2381 2403 2357 2378 2496 2446 2454 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.01 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.02 0.02 0.03 0.03 0.04 0.04 0.04 0.03 0.03 0.02 0.01 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.01 -0.02 -0.02 -0.02 -0.02 -0.03 -0.02 -0.02 -0.02 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4482

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1746

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1070

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 38

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 24

CWM

PFM

     

HCWM