Detailed information of deep learning profile BP001125.1

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This page shows detailed deep learning-derived predictions and motifs for ETS1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ETS1
Model ID: BP001125.1
Cell line/tissue: A549
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0098.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14921  
Source: ENCSR000BPU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 -0.00 0.01 0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.02 0.03 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 0.02 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 415 400 405 428 460 450 406 412 411 368 457 369 446 454 592 514 628 547 281 288 1531 66 45 22 17 0 1 26 184 334 233 357 453 409 362 432 433 389 455 439 432 386 377 360 371 379 376 423 365 393 ]
C [ 782 780 749 771 758 726 760 760 762 803 744 767 693 750 561 699 811 547 803 1198 88 1745 4 11 2239 2294 6 469 962 638 839 855 625 684 817 668 648 737 676 690 711 714 678 737 728 711 712 689 755 740 ]
G [ 691 685 728 692 670 739 748 690 712 724 608 790 805 768 744 767 522 757 623 336 557 137 24 36 22 1 2219 1698 548 740 661 725 864 820 718 739 796 762 732 745 700 761 831 741 729 738 773 744 760 753 ]
T [ 407 430 413 404 407 380 381 433 410 400 486 369 351 323 398 315 334 444 588 473 119 347 2222 2226 17 0 69 102 601 583 562 358 353 382 398 456 418 407 432 421 452 434 409 457 467 467 434 439 415 409 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 -0.01 -0.02 -0.03 -0.01 -0.01 -0.00 -0.01 -0.00 ]
C [ 0.00 -0.00 0.00 0.01 -0.01 0.01 -0.01 -0.01 0.02 0.03 -0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ -0.00 -0.00 0.00 -0.00 0.01 -0.01 -0.00 -0.01 -0.01 -0.00 0.03 0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.01 0.00 0.02 0.02 -0.01 -0.02 -0.01 -0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1747

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 188

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 121

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 101

CWM

PFM

     

HCWM

3 profiles found for the same TF (ETS1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001123.1 ETS1 ENCSR000BKA GM12878 Homo sapiens MA0098.4
BP001124.1 ETS1 ENCSR000BKQ K562 Homo sapiens MA0098.4
BP001126.1 ETS1 ENCSR534VHI GM23338 Homo sapiens MA0098.4
Showing 3 profiles of page 1 from 1 pages
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