Detailed information of deep learning profile BP001122.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF184 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF184
Model ID: BP001122.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA2120.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q99676  
Source: ENCSR546IHU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 ]
C [ -0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 0.03 -0.00 0.01 0.05 0.00 0.00 0.00 0.04 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.00 -0.00 0.02 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 ]
T [ 0.01 -0.00 0.00 0.00 -0.00 0.02 0.01 -0.00 -0.00 0.01 -0.00 0.02 0.03 0.04 0.00 0.02 -0.00 -0.00 0.01 0.00 0.00 ]

Frequency matrix

       
A [ 108 106 80 94 97 107 122 111 115 89 85 159 131 63 175 144 105 389 4 6 105 200 127 7 20 1 3 1 32 337 183 72 99 87 88 87 112 113 124 106 113 123 120 124 134 124 114 121 117 113 ]
C [ 169 141 163 158 167 135 137 164 154 145 103 102 113 80 111 42 50 46 161 8 387 86 175 494 73 47 6 446 65 110 56 94 86 147 145 179 155 138 124 116 131 116 147 131 137 126 128 129 133 128 ]
G [ 87 101 109 84 101 111 103 103 69 72 98 107 153 126 107 119 225 44 3 265 7 153 6 4 2 10 3 2 18 13 137 119 108 61 82 96 89 104 111 116 96 113 103 107 95 100 102 109 122 112 ]
T [ 151 167 163 179 150 162 153 137 177 209 229 147 118 246 122 210 135 36 347 236 16 76 207 10 420 457 503 66 400 55 139 230 222 220 200 153 159 160 156 177 175 163 145 153 149 165 171 156 143 162 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.00 -0.00 0.01 0.01 0.00 0.03 -0.02 -0.01 0.02 0.02 0.01 0.00 -0.00 -0.02 -0.01 -0.01 -0.01 0.03 0.01 -0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.00 0.01 0.00 -0.00 -0.01 0.04 -0.01 0.04 0.00 0.02 0.05 0.01 0.02 -0.01 0.05 0.00 0.01 0.00 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.01 0.01 0.01 0.01 0.02 0.01 -0.02 0.03 -0.02 0.03 -0.02 -0.00 -0.00 -0.00 0.00 -0.02 0.01 -0.01 0.01 0.00 0.01 0.00 0.01 0.00 ]
T [ 0.01 0.01 0.00 0.00 0.01 0.00 0.01 0.01 0.00 0.03 0.03 -0.01 -0.01 0.02 -0.01 0.03 0.03 0.04 0.01 0.03 -0.00 0.00 0.02 0.01 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2533

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 433

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 296

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 100

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZNF184) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001121.1 ZNF184 ENCSR526HRN K562 Homo sapiens MA2120.1
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