Detailed information of deep learning profile BP001122.1

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This page shows detailed deep learning-derived predictions and motifs for ZNF184 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZNF184
Model ID: BP001122.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
JASPAR ID: MA2120.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q99676  
Source: ENCSR546IHU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 -0.00 -0.00 0.02 0.00 0.04 0.03 0.02 -0.00 0.01 -0.00 -0.00 0.01 0.02 -0.00 0.00 0.00 -0.00 0.01 ]
C [ -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.00 0.02 -0.00 0.00 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.04 0.00 0.00 0.00 0.05 0.01 -0.00 0.03 -0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.02 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 162 143 156 171 165 149 153 145 163 175 177 156 160 159 153 200 220 222 230 139 55 400 66 503 457 420 10 207 76 16 236 347 36 135 210 122 246 118 147 229 209 177 137 153 162 150 179 163 167 151 ]
C [ 112 122 109 102 100 95 107 103 113 96 116 111 104 89 96 82 61 108 119 137 13 18 2 3 10 2 4 6 153 7 265 3 44 225 119 107 126 153 107 98 72 69 103 103 111 101 84 109 101 87 ]
G [ 128 133 129 128 126 137 131 147 116 131 116 124 138 155 179 145 147 86 94 56 110 65 446 6 47 73 494 175 86 387 8 161 46 50 42 111 80 113 102 103 145 154 164 137 135 167 158 163 141 169 ]
T [ 113 117 121 114 124 134 124 120 123 113 106 124 113 112 87 88 87 99 72 183 337 32 1 3 1 20 7 127 200 105 6 4 389 105 144 175 63 131 159 85 89 115 111 122 107 97 94 80 106 108 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.01 0.02 0.00 -0.00 0.03 0.01 0.04 0.03 0.03 -0.01 0.02 -0.01 -0.01 0.03 0.03 0.00 0.01 0.01 0.00 0.01 0.00 0.00 0.01 0.01 ]
C [ 0.00 0.01 0.00 0.01 0.00 0.01 -0.01 0.01 -0.02 0.00 -0.00 -0.00 -0.00 -0.02 0.03 -0.02 0.03 -0.02 0.01 0.02 0.01 0.01 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.01 0.00 0.01 0.00 0.05 -0.01 0.02 0.01 0.05 0.02 0.00 0.04 -0.01 0.04 -0.01 -0.00 0.00 0.01 0.00 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.00 0.01 0.03 -0.01 -0.01 -0.01 -0.02 -0.00 0.00 0.01 0.02 0.02 -0.01 -0.02 0.03 0.00 0.01 0.01 -0.00 0.00 0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 2533

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 433

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 296

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 100

CWM

PFM

     

HCWM

1 profiles found for the same TF (ZNF184) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP001121.1 ZNF184 ENCSR526HRN K562 Homo sapiens MA2120.1
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