Detailed information of deep learning profile BP000990.1

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This page shows detailed deep learning-derived predictions and motifs for TFE3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFE3
Model ID: BP000990.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0831.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P19532  
Source: ENCSR589SNT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.01 -0.00 -0.00 0.02 -0.00 0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 0.05 -0.00 0.03 -0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 -0.00 0.00 0.00 -0.00 0.04 -0.00 0.06 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 0.00 0.04 -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1141 1144 1105 1093 1075 1125 1115 1143 1022 1021 1226 1208 1132 1093 1213 1088 1191 1404 2097 554 23 4034 7 647 24 12 4461 100 801 906 1025 1007 1070 967 1012 1093 1147 1081 1001 1158 1131 1141 1011 1075 1146 1119 1127 1114 1174 1107 ]
C [ 1385 1380 1410 1402 1463 1406 1345 1331 1448 1531 1473 1546 1529 1558 1556 1657 1399 1005 796 1647 5035 248 3210 199 45 25 281 3659 2086 1446 1406 1485 1364 1456 1392 1492 1415 1556 1568 1467 1426 1427 1518 1475 1467 1437 1493 1371 1336 1382 ]
G [ 1427 1422 1474 1427 1341 1334 1472 1511 1362 1334 1298 1266 1444 1332 1287 1381 1361 1815 1745 1173 30 195 329 4242 46 5051 263 240 534 1307 1503 1565 1585 1541 1511 1374 1403 1364 1317 1341 1417 1366 1357 1317 1374 1372 1345 1454 1394 1388 ]
T [ 1140 1147 1104 1171 1214 1228 1161 1108 1261 1207 1096 1073 988 1110 1037 967 1142 869 455 1719 5 616 1547 5 4978 5 88 1094 1672 1434 1159 1036 1074 1129 1178 1134 1128 1092 1207 1127 1119 1159 1207 1226 1106 1165 1128 1154 1189 1216 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.00 0.01 -0.01 -0.00 0.03 -0.04 0.01 -0.00 -0.01 0.04 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.00 0.00 0.05 -0.01 0.06 0.00 0.01 -0.03 0.00 0.03 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.02 0.00 -0.03 0.01 -0.00 0.05 -0.01 0.06 0.00 -0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.03 -0.01 0.00 0.01 -0.04 0.04 -0.00 -0.01 0.01 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3801

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2868

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1494

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 918

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 676

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 524

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 329

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 50

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 22

CWM

PFM

     

HCWM

1 profiles found for the same TF (TFE3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000991.1 TFE3 ENCSR953KEY K562 Homo sapiens MA0831.3
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