Detailed information of deep learning profile BP000901.1

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This page shows detailed deep learning-derived predictions and motifs for TFDP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TFDP1
Model ID: BP000901.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: E2F
JASPAR ID: MA1122.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q14186  
Source: ENCSR017GBO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 0.02 0.01 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.00 0.01 0.03 0.00 0.03 0.02 0.02 -0.00 -0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 512 519 502 452 565 444 546 565 582 584 626 753 684 815 669 416 6 49 1 3 31 2651 1844 975 653 475 442 547 668 590 519 483 509 521 502 528 521 504 474 475 507 493 525 461 491 552 555 493 478 509 ]
C [ 874 878 840 841 741 859 902 781 778 812 762 727 654 564 393 170 26 2760 6 24 122 63 125 613 750 713 785 702 720 707 783 808 877 849 755 812 836 808 795 859 824 879 833 836 852 823 810 869 872 875 ]
G [ 936 979 1018 1020 1030 1019 949 992 976 1054 1027 904 1021 800 993 2225 2783 3 2801 2772 2634 51 726 841 781 955 1096 1146 993 1021 966 1079 990 967 1083 1016 1031 1068 1065 996 1033 943 1001 1022 982 1013 970 963 987 942 ]
T [ 493 439 455 502 479 493 418 477 479 365 400 431 456 636 760 4 0 3 7 16 28 50 120 386 631 672 492 420 434 497 547 445 439 478 475 459 427 435 481 485 451 500 456 496 490 427 480 490 478 489 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.01 0.00 0.00 -0.01 -0.00 -0.02 -0.02 -0.01 0.02 0.01 0.01 0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 -0.00 0.01 -0.00 0.03 -0.01 0.01 0.00 -0.00 -0.01 -0.00 0.00 0.00 0.00 ]
G [ -0.00 0.00 -0.00 0.00 0.01 0.03 -0.01 0.03 0.02 0.02 -0.01 0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.01 -0.02 -0.02 -0.02 -0.02 -0.01 -0.01 -0.00 0.00 -0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3118

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2293

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 765

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 741

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 179

CWM

PFM

     

HCWM

2 profiles found for the same TF (TFDP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000902.1 TFDP1 ENCSR558OMR HepG2 Homo sapiens MA1122.2
BP000903.1 TFDP1 ENCSR901VIE K562 Homo sapiens MA1122.2
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