Detailed information of deep learning profile BP000816.1

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This page shows detailed deep learning-derived predictions and motifs for MXI1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MXI1
Model ID: BP000816.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA1108.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P50539  
Source: ENCSR000EIA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 -0.00 0.04 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]

Frequency matrix

       
A [ 859 851 887 915 891 892 821 881 833 879 865 868 846 926 953 876 888 978 905 1205 1183 841 3 4256 0 0 240 0 701 698 744 874 711 794 843 867 798 878 907 880 846 858 875 879 857 833 846 884 851 870 ]
C [ 1281 1236 1235 1248 1216 1240 1356 1287 1306 1244 1239 1319 1355 1334 1261 1384 1367 1236 1318 1053 1123 1600 4278 0 4276 0 30 6 663 1595 1377 1148 1383 1363 1244 1247 1234 1219 1289 1244 1256 1260 1284 1285 1254 1285 1310 1217 1257 1254 ]
G [ 1235 1257 1206 1234 1231 1228 1177 1239 1255 1301 1253 1242 1163 1162 1239 1169 1186 1366 1284 1356 1136 1501 0 0 0 4281 2 4020 2019 1068 992 1332 1255 1296 1265 1311 1311 1323 1199 1300 1227 1281 1220 1240 1247 1297 1224 1262 1226 1287 ]
T [ 906 937 953 884 943 921 927 874 887 857 924 852 917 859 828 852 840 701 774 667 839 339 0 25 5 0 4009 255 898 920 1168 927 932 828 929 856 938 861 886 857 952 882 902 877 923 866 901 918 947 870 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.01 0.01 0.00 0.04 -0.04 0.03 -0.01 -0.02 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.00 0.01 0.05 -0.04 0.05 -0.04 0.02 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.02 -0.02 0.03 -0.05 0.06 -0.04 0.05 0.01 0.00 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.01 -0.02 -0.01 0.03 -0.04 0.03 0.00 0.01 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 5201

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3793

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2694

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1252

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1210

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 1199

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 772

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 708

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 299

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 247

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 115

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_21

Num. of seqlets: 21

CWM

PFM

     

HCWM

7 profiles found for the same TF (MXI1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000810.1 MXI1 ENCSR000DZI GM12878 Homo sapiens MA1108.3
BP000811.1 MXI1 ENCSR000EBR H1 Homo sapiens MA1108.3
BP000812.1 MXI1 ENCSR000ECU HeLa-S3 Homo sapiens MA1108.3
BP000813.1 MXI1 ENCSR000EDU HepG2 Homo sapiens MA1108.3
BP000814.1 MXI1 ENCSR000EFE IMR-90 Homo sapiens MA1108.3
BP000815.1 MXI1 ENCSR000EGZ K562 Homo sapiens MA1108.3
BP000817.1 MXI1 ENCSR934NHU neural cell Homo sapiens MA1108.3
Showing 7 profiles of page 1 from 1 pages
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