Detailed information of deep learning profile BP000745.1

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This page shows detailed deep learning-derived predictions and motifs for ZEB1 in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000745.1
Cell line/tissue: bipolar neuron
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR418KUS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.04 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.03 0.04 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.02 0.00 0.00 0.01 0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.02 0.02 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 23 17 27 19 30 19 27 25 14 14 19 15 26 23 27 10 26 4 103 0 2 0 0 11 21 12 16 20 9 103 0 5 0 20 20 32 22 27 21 20 29 27 22 19 25 29 26 32 12 19 ]
C [ 28 26 17 34 29 36 38 30 29 45 31 38 24 39 21 43 34 85 0 91 101 0 0 38 38 36 26 49 83 0 25 34 0 5 26 26 28 27 37 31 34 34 31 30 36 27 35 20 35 43 ]
G [ 29 36 39 25 24 28 20 24 31 28 26 30 34 26 33 32 20 0 0 4 0 0 102 36 22 29 42 22 2 0 74 64 0 72 43 31 37 27 19 37 28 25 30 32 20 35 22 30 27 27 ]
T [ 23 24 20 25 20 20 18 24 29 16 27 20 19 15 22 18 23 14 0 8 0 103 1 18 22 26 19 12 9 0 4 0 103 6 14 14 16 22 26 15 12 17 20 22 22 12 20 21 29 14 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.00 -0.02 0.05 -0.04 -0.01 -0.03 -0.00 -0.01 -0.01 -0.01 -0.00 -0.00 -0.00 0.04 -0.04 -0.01 -0.02 0.01 -0.00 -0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.03 -0.01 0.03 0.04 -0.02 -0.02 0.01 0.01 0.01 0.00 0.01 0.02 -0.01 0.01 0.01 -0.01 -0.02 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.02 -0.02 0.02 0.01 -0.01 0.03 0.01 0.00 0.01 0.02 0.01 -0.02 -0.01 0.03 0.02 -0.01 0.02 0.00 0.00 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.00 0.01 -0.03 -0.00 -0.05 0.05 -0.01 0.00 -0.00 -0.01 -0.01 -0.01 0.00 -0.02 -0.01 -0.03 0.04 -0.01 -0.00 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 34

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000743.1 ZEB1 ENCSR000BND GM12878 Homo sapiens MA0103.4
BP000744.1 ZEB1 ENCSR000BVN HepG2 Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
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