Detailed information of deep learning profile BP000705.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000705.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR502OEK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.06 0.07 -0.00 0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.02 0.00 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 0.00 -0.00 0.01 -0.00 0.00 0.01 0.01 ]

Frequency matrix

       
A [ 2539 2577 2536 2479 2520 2547 2393 2626 2494 2376 2553 2373 2647 2775 2783 2453 2611 2123 1328 1521 7306 36 68 11 22 2 11 185 2006 2603 1846 1729 2248 2337 2344 2415 2492 2531 2501 2431 2604 2456 2377 2438 2488 2431 2460 2383 2472 2475 ]
C [ 4137 4114 3888 3895 4163 3977 4305 4242 4137 4076 3985 4163 4192 4267 3835 4465 4186 3942 5406 6376 1146 10758 9 17 12925 12950 168 2841 3044 2514 3524 4994 3961 3785 3920 4005 3956 4005 3854 4083 4070 3930 4084 4064 3728 3947 4034 4135 3999 4168 ]
G [ 3370 3349 3679 3790 3431 3422 3472 3307 3349 3658 3532 3654 3453 3297 3651 3447 3097 3996 3288 2413 2892 727 15 23 6 1 7448 8939 4596 1610 2102 3165 3657 4025 3913 3624 3675 3447 3494 3431 3285 3524 3615 3485 3535 3661 3396 3447 3392 3470 ]
T [ 2909 2915 2852 2791 2841 3009 2785 2780 2975 2845 2885 2765 2663 2616 2686 2590 3061 2894 2933 2645 1611 1434 12863 12904 2 2 5328 990 3309 6228 5483 3067 3089 2808 2778 2911 2832 2972 3106 3010 2996 3045 2879 2968 3204 2916 3065 2990 3092 2842 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.02 -0.03 -0.00 -0.01 -0.02 -0.03 -0.05 -0.02 0.00 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.01 0.03 -0.04 -0.02 0.06 0.07 -0.01 0.01 -0.00 -0.00 0.00 0.01 ]
G [ 0.01 0.01 0.00 0.01 0.00 -0.01 -0.02 -0.02 -0.02 0.05 0.02 0.01 -0.01 -0.00 0.01 ]
T [ -0.00 0.00 0.00 -0.00 0.01 0.05 0.05 -0.02 -0.03 0.01 -0.00 0.00 0.02 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 264

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 131

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages