Detailed information of deep learning profile BP000697.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000697.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.01 0.01 0.00 -0.00 0.00 0.00 0.00 0.07 0.06 0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.01 0.02 0.04 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.00 0.09 0.07 0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3493 3545 3581 3561 3547 3670 3546 3463 3630 3488 3513 3636 3601 3318 3454 3304 3517 3699 3733 6320 7236 3707 984 6864 0 2 16360 16188 2061 2011 3349 3469 3513 3590 3232 3238 3251 3204 3372 3519 3371 3461 3348 3349 3514 3466 3306 3431 3491 3470 ]
C [ 4689 4656 4742 4647 4785 4788 4684 4809 4637 4520 4656 4705 4602 4953 4828 5211 5160 4731 4346 3202 2522 6136 11968 9294 0 6 13 15 1131 4166 3201 4618 5173 4115 4563 4816 4445 4645 4824 4477 4793 4688 4484 4623 4564 4654 4798 4743 4612 4650 ]
G [ 4982 5017 5040 5081 5067 4890 5137 5047 4928 5078 5108 4967 5137 5037 4966 4875 4864 5134 6151 4376 3463 4122 3142 240 16417 16405 16 2 13122 1595 7794 6570 5066 5442 5544 5070 5262 5360 5081 5166 5142 5106 5325 5326 5170 5123 5171 5006 5155 5083 ]
T [ 3253 3199 3054 3128 3018 3069 3050 3098 3222 3331 3140 3109 3077 3109 3169 3027 2876 2853 2187 2519 3196 2452 323 19 0 4 28 212 103 8645 2073 1760 2665 3270 3078 3293 3459 3208 3140 3255 3111 3162 3260 3119 3169 3174 3142 3237 3159 3214 ]

Hypothetical CWM

   
A [ 0.00 0.01 0.02 0.00 -0.00 0.01 -0.03 -0.03 0.07 0.06 0.01 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 -0.00 -0.01 0.01 0.03 0.06 -0.03 -0.02 -0.02 -0.01 0.00 0.02 0.00 0.01 0.01 ]
G [ 0.01 0.00 -0.00 -0.00 0.01 -0.01 0.09 0.07 -0.03 -0.04 0.03 -0.01 0.02 0.01 0.01 ]
T [ -0.00 0.00 0.01 0.01 -0.03 -0.05 -0.04 -0.02 -0.00 0.01 -0.03 0.03 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1015

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 914

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 141

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 57

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages