Detailed information of deep learning profile BP000667.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000667.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EBZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.02 -0.00 0.00 0.09 -0.00 -0.00 0.00 0.10 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.10 0.00 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.00 0.09 -0.00 0.05 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.10 0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1333 1351 1334 1190 1159 1211 1200 1251 1252 1428 1115 1286 1061 1040 1375 1312 1560 1243 971 1112 2244 5 11 4902 235 5 43 4954 69 861 1207 1005 1038 1101 1142 1153 1166 1215 1301 1097 1122 1195 1276 1299 1205 1195 1181 1128 1206 1218 ]
C [ 1206 1188 1241 1202 1243 1194 1363 1166 1237 1125 1079 1098 1298 1357 1079 1328 1036 996 1007 882 971 25 2 15 16 4 4916 7 1823 2233 1527 1652 1355 1353 1512 1381 1282 1275 1411 1343 1264 1253 1280 1221 1278 1240 1255 1333 1258 1192 ]
G [ 1241 1264 1221 1399 1252 1403 1307 1280 1443 1341 1398 1360 1287 1331 1321 1273 1384 1736 1978 2050 1590 14 4803 7 4680 8 5 5 785 699 1313 1002 1283 1185 1148 1307 1453 1338 1172 1172 1355 1269 1293 1245 1243 1250 1293 1265 1246 1354 ]
T [ 1188 1165 1172 1177 1314 1160 1098 1271 1036 1074 1376 1224 1322 1240 1193 1055 988 993 1012 924 163 4924 152 44 37 4951 4 2 2291 1175 921 1309 1292 1329 1166 1127 1067 1140 1084 1356 1227 1251 1119 1203 1242 1283 1239 1242 1258 1204 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 0.00 0.04 -0.06 -0.05 0.09 -0.02 -0.03 0.02 0.10 -0.05 -0.00 0.00 -0.00 -0.00 ]
C [ 0.02 0.02 0.02 0.01 0.01 0.01 -0.05 0.01 0.05 -0.04 0.10 -0.05 0.03 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.04 0.03 -0.04 0.10 -0.05 0.05 -0.02 -0.05 0.02 0.01 0.00 0.02 0.02 0.02 ]
T [ -0.00 -0.00 0.00 -0.00 -0.05 0.09 0.03 -0.03 -0.03 0.10 -0.05 -0.06 0.04 0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3032

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2134

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 891

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 628

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 238

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 180

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 86

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages