Detailed information of deep learning profile BP000519.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000519.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR946WBN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.01 -0.00 0.02 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 322 322 343 338 327 317 358 333 324 338 336 377 322 330 349 309 377 333 365 282 325 492 0 3 1413 15 8 85 1410 65 294 286 250 226 287 302 314 381 315 344 340 298 353 311 320 347 312 307 308 328 ]
C [ 346 385 352 364 363 376 341 386 421 400 363 362 379 417 398 388 344 387 324 466 236 299 2 2 0 1273 1 1315 1 449 559 542 451 443 360 370 348 377 356 385 411 428 361 397 408 391 421 363 376 385 ]
G [ 405 395 402 388 391 411 346 365 371 357 420 369 345 380 357 381 387 448 450 419 537 601 0 1358 0 35 36 1 1 378 303 332 297 298 375 375 375 352 376 367 342 355 384 378 354 396 348 395 375 343 ]
T [ 340 311 316 323 332 309 368 329 297 318 294 305 367 286 309 335 305 245 274 246 315 21 1411 50 0 90 1368 12 1 521 257 253 415 446 391 366 376 303 366 317 320 332 315 327 331 279 332 348 354 357 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.00 0.01 -0.02 -0.00 0.03 -0.01 -0.01 0.00 0.03 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.02 -0.00 0.01 -0.01 0.02 -0.01 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 -0.01 0.02 -0.01 0.01 -0.00 -0.02 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.03 0.00 -0.01 -0.01 0.02 -0.00 -0.02 0.01 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1329

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 204

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 58

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000522.1 JUN ENCSR996DUT A549 Homo sapiens MA1128.2
Showing 1 profiles of page 4 from 4 pages