Detailed information of deep learning profile BP000518.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000518.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR793HZD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.02 0.00 0.00 -0.00 0.02 0.00 -0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1283 1363 1332 1481 1389 1418 1394 1337 1415 1453 1281 1361 1428 1358 1289 1717 1393 1476 1281 1529 2427 0 0 5156 282 15 414 5155 255 1234 1309 1176 1124 1286 1424 1344 1406 1390 1584 1292 1323 1400 1353 1430 1472 1359 1435 1355 1402 1334 ]
C [ 1213 1183 1272 1179 1232 1148 1167 1240 1259 1144 1114 1185 1259 1267 1257 1153 1216 1132 1340 853 828 2 0 2 4223 2 4747 2 1483 1834 1520 1453 1326 1255 1186 1178 1172 1284 1221 1202 1239 1255 1209 1226 1135 1197 1178 1226 1195 1162 ]
G [ 1201 1182 1185 1179 1201 1164 1194 1185 1162 1191 1186 1275 1157 1220 1172 1133 1420 1445 1268 1595 1801 0 4982 0 42 19 0 4 1297 862 1232 1097 1095 1159 1141 1283 1170 1061 1058 1126 1207 1122 1238 1144 1252 1209 1182 1200 1152 1283 ]
T [ 1466 1435 1374 1324 1341 1433 1408 1401 1327 1375 1582 1342 1319 1318 1445 1160 1134 1110 1274 1186 107 5161 181 5 616 5127 2 2 2128 1233 1102 1437 1618 1463 1412 1358 1415 1428 1300 1543 1394 1386 1363 1363 1304 1398 1368 1382 1414 1384 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.02 -0.01 -0.01 0.01 0.02 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.02 -0.00 0.01 -0.01 0.02 -0.01 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.01 0.02 -0.01 0.01 0.01 -0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.02 0.01 -0.01 -0.00 0.02 -0.01 -0.01 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3755

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2968

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1978

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1555

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 487

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 359

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 162

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 145

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 75

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 65

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages