Detailed information of deep learning profile BP000517.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000517.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR783THJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 -0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1886 2014 1859 1896 1939 2053 2014 1939 1970 1902 1964 1915 1966 1971 2199 1799 1964 1963 1862 2079 2147 2373 1977 1667 1814 3086 0 9 7135 821 5 479 7233 255 1636 1817 1715 1534 1664 1998 1942 1906 1953 2169 1896 1868 1958 2035 1999 1923 ]
C [ 1826 1640 1708 1831 1826 1650 1652 1623 1699 1692 1595 1686 1641 1697 1552 1463 1443 1683 1834 1582 1725 1486 1560 1741 1406 1895 11 0 25 19 3 6758 0 2530 2346 1826 1954 1862 1672 1747 1717 1591 1708 1649 1645 1551 1700 1676 1637 1634 ]
G [ 1601 1628 1689 1677 1618 1615 1694 1646 1732 1599 1730 1647 1719 1751 1715 1654 1771 1601 1574 1648 1621 1798 2104 2121 2328 1789 0 6506 2 5884 3 0 4 1218 1193 1919 1532 1811 1617 1629 1739 1826 1696 1667 1536 1865 1672 1656 1634 1653 ]
T [ 1924 1955 1981 1833 1854 1919 1877 2029 1836 2044 1948 1989 1911 1818 1771 2321 2059 1990 1967 1928 1744 1580 1596 1708 1689 467 7226 722 75 513 7226 0 0 3234 2062 1675 2036 2030 2284 1863 1839 1914 1880 1752 2160 1953 1907 1870 1967 2027 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.02 -0.01 -0.01 0.01 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 0.00 -0.02 0.00 0.01 -0.01 0.03 -0.02 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.01 0.02 -0.01 0.01 -0.00 -0.02 0.00 0.00 0.01 0.01 0.00 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.03 -0.01 -0.02 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1995

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 733

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 603

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 263

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 37

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages