Detailed information of deep learning profile BP000517.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000517.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR783THJ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2027 1967 1870 1907 1953 2160 1752 1880 1914 1839 1863 2284 2030 2036 1675 2062 3234 0 0 7226 513 75 722 7226 467 1689 1708 1596 1580 1744 1928 1967 1990 2059 2321 1771 1818 1911 1989 1948 2044 1836 2029 1877 1919 1854 1833 1981 1955 1924 ]
C [ 1653 1634 1656 1672 1865 1536 1667 1696 1826 1739 1629 1617 1811 1532 1919 1193 1218 4 0 3 5884 2 6506 0 1789 2328 2121 2104 1798 1621 1648 1574 1601 1771 1654 1715 1751 1719 1647 1730 1599 1732 1646 1694 1615 1618 1677 1689 1628 1601 ]
G [ 1634 1637 1676 1700 1551 1645 1649 1708 1591 1717 1747 1672 1862 1954 1826 2346 2530 0 6758 3 19 25 0 11 1895 1406 1741 1560 1486 1725 1582 1834 1683 1443 1463 1552 1697 1641 1686 1595 1692 1699 1623 1652 1650 1826 1831 1708 1640 1826 ]
T [ 1923 1999 2035 1958 1868 1896 2169 1953 1906 1942 1998 1664 1534 1715 1817 1636 255 7233 479 5 821 7135 9 0 3086 1814 1667 1977 2373 2147 2079 1862 1963 1964 1799 2199 1971 1966 1915 1964 1902 1970 1939 2014 2053 1939 1896 1859 2014 1886 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.03 -0.01 -0.01 0.01 0.03 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.00 0.01 0.01 0.00 0.00 -0.02 -0.00 0.01 -0.01 0.02 -0.01 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.01 -0.02 0.03 -0.01 0.01 0.00 -0.02 0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.02 -0.01 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5261

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2179

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1995

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 733

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 603

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 263

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 37

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages