Detailed information of deep learning profile BP000516.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000516.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR761RDU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.04 0.00 0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1305 1351 1295 1303 1327 1408 1347 1383 1339 1246 1326 1368 1348 1369 1516 1199 1337 1343 1207 1409 1451 1579 1387 1205 1298 2079 0 6 4855 608 1 68 4901 205 1168 1259 1208 1106 1115 1432 1347 1295 1286 1507 1281 1255 1303 1433 1328 1265 ]
C [ 1208 1040 1107 1220 1173 1125 1122 1120 1114 1120 1111 1088 1090 1115 1033 1009 950 1084 1241 1025 1056 971 1001 1082 933 1244 6 2 15 18 0 4836 0 1627 1539 1245 1298 1129 1089 1104 1206 1086 1193 1101 1060 1061 1125 1095 1109 1137 ]
G [ 1050 1127 1147 1113 1086 1068 1136 1070 1147 1109 1149 1073 1136 1167 1100 1155 1194 1101 1138 1079 1097 1236 1417 1397 1530 1232 0 4627 2 3872 2 0 3 896 739 1293 981 1273 1098 1114 1134 1130 1121 1032 1080 1249 1176 1093 1144 1144 ]
T [ 1341 1386 1355 1268 1318 1303 1299 1331 1304 1429 1318 1375 1330 1253 1255 1541 1423 1376 1318 1391 1300 1118 1099 1220 1143 349 4898 269 32 406 4901 0 0 2176 1458 1107 1417 1396 1602 1254 1217 1393 1304 1264 1483 1339 1300 1283 1323 1358 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.02 0.03 -0.01 -0.02 0.01 0.04 -0.02 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 -0.00 -0.03 0.00 0.01 -0.02 0.04 -0.02 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.03 0.03 -0.03 0.01 -0.01 -0.04 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 0.01 -0.02 -0.01 0.04 -0.02 -0.03 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2510

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1713

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 440

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 38

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages