Detailed information of deep learning profile BP000516.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000516.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR761RDU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 0.00 0.00 0.04 -0.00 -0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1358 1323 1283 1300 1339 1483 1264 1304 1393 1217 1254 1602 1396 1417 1107 1458 2176 0 0 4901 406 32 269 4898 349 1143 1220 1099 1118 1300 1391 1318 1376 1423 1541 1255 1253 1330 1375 1318 1429 1304 1331 1299 1303 1318 1268 1355 1386 1341 ]
C [ 1144 1144 1093 1176 1249 1080 1032 1121 1130 1134 1114 1098 1273 981 1293 739 896 3 0 2 3872 2 4627 0 1232 1530 1397 1417 1236 1097 1079 1138 1101 1194 1155 1100 1167 1136 1073 1149 1109 1147 1070 1136 1068 1086 1113 1147 1127 1050 ]
G [ 1137 1109 1095 1125 1061 1060 1101 1193 1086 1206 1104 1089 1129 1298 1245 1539 1627 0 4836 0 18 15 2 6 1244 933 1082 1001 971 1056 1025 1241 1084 950 1009 1033 1115 1090 1088 1111 1120 1114 1120 1122 1125 1173 1220 1107 1040 1208 ]
T [ 1265 1328 1433 1303 1255 1281 1507 1286 1295 1347 1432 1115 1106 1208 1259 1168 205 4901 68 1 608 4855 6 0 2079 1298 1205 1387 1579 1451 1409 1207 1343 1337 1199 1516 1369 1348 1368 1326 1246 1339 1383 1347 1408 1327 1303 1295 1351 1305 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.03 -0.02 0.04 -0.01 -0.02 0.01 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.04 -0.01 0.01 -0.03 0.03 -0.03 0.01 0.01 0.00 0.01 0.00 ]
G [ 0.00 0.01 0.00 0.01 0.01 -0.02 0.04 -0.02 0.01 0.00 -0.03 -0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.02 0.04 0.01 -0.02 -0.01 0.03 -0.02 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2510

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1745

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1713

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 440

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 331

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 38

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages