Detailed information of deep learning profile BP000513.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000513.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR708DGM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.03 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1585 1703 1633 1600 1641 1706 1688 1674 1694 1556 1642 1622 1641 1666 1860 1505 1663 1602 1471 1783 1821 1915 1689 1443 1588 2535 1 0 5953 750 10 25 6030 264 1370 1535 1407 1342 1358 1645 1590 1574 1615 1806 1587 1538 1607 1695 1633 1632 ]
C [ 1517 1303 1365 1468 1448 1405 1302 1405 1342 1384 1325 1369 1320 1423 1279 1177 1179 1419 1560 1246 1373 1250 1240 1343 1100 1489 6 0 15 5 0 6006 0 2060 1929 1545 1620 1519 1387 1444 1414 1284 1428 1426 1383 1309 1385 1330 1375 1391 ]
G [ 1313 1351 1413 1380 1350 1342 1424 1300 1403 1336 1445 1389 1388 1468 1343 1397 1474 1335 1368 1317 1354 1505 1705 1794 1916 1641 1 6003 3 4821 7 0 1 1041 929 1557 1268 1442 1304 1333 1447 1495 1419 1293 1246 1525 1424 1396 1384 1336 ]
T [ 1616 1674 1620 1583 1592 1578 1617 1652 1592 1755 1619 1651 1682 1474 1549 1952 1715 1675 1632 1685 1483 1361 1397 1451 1427 366 6023 28 60 455 6014 0 0 2666 1803 1394 1736 1728 1982 1609 1580 1678 1569 1506 1815 1659 1615 1610 1639 1672 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.02 0.03 -0.01 -0.01 0.01 0.04 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 -0.00 -0.03 0.00 0.01 -0.02 0.03 -0.02 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.01 -0.02 0.03 -0.02 0.02 -0.01 -0.03 -0.00 -0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.03 -0.02 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5326

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1963

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 460

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 415

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 250

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 47

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages