Detailed information of deep learning profile BP000513.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000513.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR708DGM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1672 1639 1610 1615 1659 1815 1506 1569 1678 1580 1609 1982 1728 1736 1394 1803 2666 0 0 6014 455 60 28 6023 366 1427 1451 1397 1361 1483 1685 1632 1675 1715 1952 1549 1474 1682 1651 1619 1755 1592 1652 1617 1578 1592 1583 1620 1674 1616 ]
C [ 1336 1384 1396 1424 1525 1246 1293 1419 1495 1447 1333 1304 1442 1268 1557 929 1041 1 0 7 4821 3 6003 1 1641 1916 1794 1705 1505 1354 1317 1368 1335 1474 1397 1343 1468 1388 1389 1445 1336 1403 1300 1424 1342 1350 1380 1413 1351 1313 ]
G [ 1391 1375 1330 1385 1309 1383 1426 1428 1284 1414 1444 1387 1519 1620 1545 1929 2060 0 6006 0 5 15 0 6 1489 1100 1343 1240 1250 1373 1246 1560 1419 1179 1177 1279 1423 1320 1369 1325 1384 1342 1405 1302 1405 1448 1468 1365 1303 1517 ]
T [ 1632 1633 1695 1607 1538 1587 1806 1615 1574 1590 1645 1358 1342 1407 1535 1370 264 6030 25 10 750 5953 0 1 2535 1588 1443 1689 1915 1821 1783 1471 1602 1663 1505 1860 1666 1641 1622 1642 1556 1694 1674 1688 1706 1641 1600 1633 1703 1585 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.02 0.03 -0.01 -0.01 0.01 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 -0.00 -0.03 -0.01 0.02 -0.02 0.03 -0.02 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.01 -0.02 0.03 -0.02 0.01 0.00 -0.03 -0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.04 0.01 -0.01 -0.01 0.03 -0.02 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5326

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1963

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1214

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 460

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 415

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 250

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 128

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 47

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages