Detailed information of deep learning profile BP000507.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000507.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR489DIG
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.03 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 0.00 -0.00 0.03 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1307 1307 1219 1205 1274 1366 1148 1232 1276 1208 1195 1459 1320 1281 1122 1310 2060 0 1 4676 416 42 355 4676 286 1115 1117 1057 1027 1125 1320 1236 1281 1383 1490 1219 1159 1198 1356 1281 1349 1221 1286 1265 1249 1236 1200 1290 1280 1295 ]
C [ 1067 1054 1061 1138 1170 1004 1068 1095 1143 1155 1084 1018 1121 1012 1181 748 905 3 0 3 3728 0 4321 3 1272 1466 1371 1320 1188 1096 1049 1024 1040 1152 1076 1033 1116 1195 1052 1110 1044 1102 1071 1126 1074 1068 1082 1093 1065 1052 ]
G [ 1038 1025 1095 1044 993 1049 1058 1113 1024 1080 1082 1092 1219 1266 1222 1541 1496 1 4470 0 18 7 0 2 1168 906 1108 968 941 1055 1019 1259 1116 927 925 984 1118 980 1079 1014 1072 1052 1059 1009 1041 1131 1117 1092 1071 1125 ]
T [ 1270 1296 1307 1295 1245 1263 1408 1242 1239 1239 1321 1113 1022 1123 1157 1083 221 4678 211 3 520 4633 6 1 1956 1195 1086 1337 1526 1406 1294 1163 1245 1220 1191 1446 1289 1309 1195 1277 1217 1307 1266 1282 1318 1247 1283 1207 1266 1210 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.03 -0.02 0.03 -0.01 -0.01 0.01 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.00 -0.00 -0.04 -0.01 0.01 -0.03 0.03 -0.02 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.04 -0.02 0.01 0.00 -0.04 0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.04 0.01 -0.02 -0.01 0.03 -0.02 -0.02 0.01 -0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3501

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2840

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1466

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 731

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 173

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 74

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 57

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 40

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages