Detailed information of deep learning profile BP000502.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000502.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR048CVK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1431 1464 1355 1378 1445 1545 1278 1387 1418 1323 1335 1559 1508 1426 1197 1544 2460 0 0 5204 277 77 593 5203 355 1180 1257 1253 1168 1313 1514 1467 1436 1410 1621 1323 1342 1374 1408 1415 1439 1350 1437 1325 1397 1340 1388 1367 1420 1435 ]
C [ 1231 1198 1175 1277 1275 1079 1170 1265 1219 1269 1206 1191 1178 1139 1372 811 840 1 0 3 4128 0 4606 0 1346 1730 1532 1436 1331 1111 1166 1163 1188 1272 1158 1185 1242 1242 1208 1231 1129 1217 1160 1248 1169 1189 1196 1222 1190 1158 ]
G [ 1212 1166 1240 1190 1155 1238 1199 1209 1154 1178 1185 1236 1372 1380 1334 1625 1752 0 4898 0 60 19 1 6 1462 995 1196 1062 1062 1203 1119 1290 1225 1091 1117 1199 1191 1148 1231 1203 1290 1243 1219 1221 1199 1269 1257 1213 1178 1270 ]
T [ 1336 1382 1440 1365 1335 1348 1563 1349 1419 1440 1484 1224 1152 1265 1307 1230 158 5209 312 3 745 5114 10 1 2047 1305 1225 1459 1649 1583 1411 1290 1361 1437 1314 1503 1435 1446 1363 1361 1352 1400 1394 1416 1445 1412 1369 1408 1422 1347 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.03 -0.01 -0.01 0.01 0.03 -0.01 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.02 -0.01 0.01 -0.02 0.02 -0.02 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.02 0.02 -0.01 0.01 0.00 -0.02 -0.00 0.00 0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.02 -0.01 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1566

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1530

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 430

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 275

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages