JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0157.2 FOXO3 Homo sapiens Fork FOX
MA0157.3 Foxo3 Mus musculus Fork FOX
MA0157.4 Foxo3 Mus musculus Fork FOX
MA0158.1 HOXA5 Homo sapiens Mus musculus Homeo HOX
MA0158.2 HOXA5 Homo sapiens Homeo HOX
MA0159.1 RARA::RXRA Homo sapiens Nuclear Thyroid::RXR-related
MA0160.1 NR4A2 Homo sapiens Mus musculus Rattus norvegicus Nuclear NGFI-B-related
MA0160.2 NR4A2 Homo sapiens Nuclear NGFI-B-related
MA0160.3 NR4A2 Homo sapiens Nuclear NGFI-B-related
MA0161.1 NFIC Homo sapiens SMAD/NF-1 Nuclear
MA0161.2 NFIC Homo sapiens SMAD/NF-1 Nuclear
MA0161.3 NFIC Homo sapiens SMAD/NF-1 Nuclear
MA0162.1 Egr1 Mus musculus C2H2 Three-zinc
MA0162.2 EGR1 Homo sapiens C2H2 Three-zinc
MA0162.3 EGR1 Homo sapiens C2H2 Three-zinc
MA0162.4 EGR1 Homo sapiens C2H2 Three-zinc
MA0162.5 EGR1 Homo sapiens C2H2 Three-zinc
MA0163.1 PLAG1 Homo sapiens C2H2 More
MA0164.1 Nr2e3 Mus musculus Nuclear RXR-related
MA0164.2 Nr2e3 Mus musculus Nuclear RXR-related
MA0165.1 Abd-B Drosophila melanogaster Homeo HOX
MA0166.1 Antp Drosophila melanogaster Homeo HOX
MA0167.1 Awh Drosophila melanogaster Homeo HD-LIM
MA0168.1 B-H1 Drosophila melanogaster Homeo HOX
MA0169.1 B-H2 Drosophila melanogaster Homeo HOX
Showing 25 profiles of page 17 from 172 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.