JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1093.1 WRKY75 Arabidopsis thaliana GCM WRKY
MA1093.2 WRKY75 Arabidopsis thaliana GCM WRKY
MA1094.1 WRKY8 Arabidopsis thaliana GCM WRKY
MA1094.2 WRKY8 Arabidopsis thaliana GCM WRKY
MA1094.3 WRKY8 Arabidopsis thaliana GCM WRKY
MA1095.1 ARALYDRAFT_495258 Arabidopsis lyrata subsp. lyrata TCP
MA1096.1 ARALYDRAFT_496250 Arabidopsis lyrata subsp. lyrata TCP
MA1097.1 ARALYDRAFT_493022 Arabidopsis lyrata subsp. lyrata TCP
MA1098.1 ARALYDRAFT_484486 Arabidopsis lyrata subsp. lyrata TCP
MA1099.1 Hes1 Mus musculus Basic Hairy-related
MA1099.2 HES1 Homo sapiens Basic Hairy-related
MA1099.3 HES1 Homo sapiens Basic Hairy-related
MA1100.1 ASCL1 Homo sapiens Basic MyoD/ASC-related
MA1100.2 ASCL1 Homo sapiens Basic MyoD/ASC-related
MA1100.3 ASCL1 Homo sapiens Basic MyoD/ASC-related
MA1101.1 BACH2 Homo sapiens Basic Jun-related
MA1101.2 BACH2 Homo sapiens Basic Jun-related
MA1101.3 BACH2 Homo sapiens Basic Jun-related
MA1102.1 CTCFL Homo sapiens C2H2 More
MA1102.2 CTCFL Homo sapiens C2H2 More
MA1102.3 CTCFL Homo sapiens C2H2 More
MA1103.1 FOXK2 Homo sapiens Fork FOX
MA1103.2 FOXK2 Homo sapiens Fork FOX
MA1103.3 FOXK2 Homo sapiens Fork FOX
MA1104.1 GATA6 Homo sapiens Other C4-GATA-related
Showing 25 profiles of page 86 from 172 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.