JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2377.1 cassava45561.m1 NA TCP
MA2378.1 CRF3 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA2379.1 DOF3.1 Arabidopsis thaliana Other DOF
MA2380.1 DOF4.7 Arabidopsis thaliana Other DOF
MA2381.1 e_gw1.170.52.1 Physcomitrium patens Other DOF
MA2382.1 e_gw1.209.40.1 Physcomitrium patens Basic bHLH
MA2383.1 e_gw1.392.16.1 Physcomitrium patens Other DOF
MA2384.1 estExt_Genewise1.C_2060077 Physcomitrium patens Basic bZIP
MA2385.1 estExt_gwp_gw1.C_220046 Physcomitrium patens Fork E2F
MA2386.1 estExt_gwp_gw1.C_550163 Physcomitrium patens AP2/EREBP ERF/DREB
MA2387.1 NAC094 Arabidopsis thaliana GCM NAC
MA2388.1 GATA1 Arabidopsis thaliana Other C4-GATA-related
MA2389.1 GBF1 Arabidopsis thaliana Basic
MA2390.1 GLYMA19G26560 Glycine max Basic
MA2391.1 Lg3 Zea mays Homeo TALE-type
MA2392.1 GRMZM2G135447 Zea mays Homeo TALE-type
MA2393.1 PHYPA_008731 Physcomitrium patens Basic
MA2394.1 PpDof6 Physcomitrium patens Other DOF
MA2395.1 PHYPA_011264 Physcomitrium patens AP2/EREBP ERF/DREB
MA2396.1 IDD1 Arabidopsis thaliana C2H2 IDD
MA2397.1 ILR3 Arabidopsis thaliana Basic
MA2398.1 AS2 Arabidopsis thaliana Other LBD
MA2399.1 LjSGA_053525.1 NA TCP
MA2400.1 LjTCP20 NA TCP
MA2401.1 Os05g0437700 Oryza sativa Basic
MA2402.1 OsERF104 Oryza sativa AP2/EREBP ERF/DREB
MA2403.1 DVH24_040989 NA Tryptophan Trihelix
MA2404.1 OsTRBF3 Oryza sativa Tryptophan MYB-related
MA2405.1 OsMSL08 Oryza sativa Tryptophan Trihelix
MA2406.1 PK03576.1 Cannabis sativa Basic bHLH
MA2407.1 PK24978.1 Cannabis sativa Basic Group
MA2408.1 BAD1 Zea mays TCP
MA2409.1 ZmbZIP25 Zea mays Basic D
MA2410.1 ZmbZIP54 Zea mays Basic S
MA2411.1 ZmbZIP57 Zea mays Basic S
MA2412.1 ZmbZIP72 Zea mays Basic S
MA2413.1 ZmbZIP96 Zea mays Basic D
MA2414.1 EREB127 Zea mays AP2/EREBP ERF/DREB
MA2415.1 EREB138 Zea mays AP2/EREBP ERF/DREB
MA2416.1 EREB29 Zea mays AP2/EREBP ERF/DREB
MA2417.1 EREB71 Zea mays AP2/EREBP ERF/DREB
MA2418.1 IG1 Zea mays Other LBD
MA2419.1 UB3 Zea mays C3H(C),C2HC SBP
MA2420.1 SBP6 Zea mays C3H(C),C2HC SBP
MA2421.1 SBP8 Zea mays C3H(C),C2HC SBP
MA2422.1 OsbZIP42 Oryza sativa Basic Group
MA2423.1 OsbZIP69 Oryza sativa Basic Group
MA2424.1 OsbZIP77 Oryza sativa Basic Group
MA2425.1 SPL11A Triticum aestivum C3H(C),C2HC SBP
MA2426.1 SPL11B Triticum aestivum C3H(C),C2HC SBP
Showing 50 profiles of page 85 from 86 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.