JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2227.1 esg Drosophila melanogaster C2H2 More
MA2228.1 Ets65A Drosophila melanogaster Tryptophan Ets-related
MA2229.1 Ets96B Drosophila melanogaster Tryptophan Ets-related
MA2230.1 Ets97D Drosophila melanogaster Tryptophan Ets-related
MA2231.1 Ets98B Drosophila melanogaster Tryptophan Ets-related
MA2232.1 fd59A Drosophila melanogaster Fork FOX
MA2233.1 Fer1 Drosophila melanogaster Basic Tal-related
MA2234.1 Fer2 Drosophila melanogaster Basic Tal-related
MA2235.1 FoxL1 Drosophila melanogaster Fork FOX
MA2236.1 foxo Drosophila melanogaster Fork FOX
MA2237.1 FoxP Drosophila melanogaster Fork FOX
MA2238.1 GATAe Drosophila melanogaster Other C4-GATA-related
MA2239.1 gsb Drosophila melanogaster Paired Paired
MA2240.1 Hey Drosophila melanogaster Basic Hairy-related
MA2241.1 HLH4C Drosophila melanogaster Basic Tal-related
MA2242.1 Hnf4 Drosophila melanogaster Nuclear RXR-related
MA2243.1 Hr38 Drosophila melanogaster Nuclear NGFI-B-related
MA2244.1 Hr39 Drosophila melanogaster Nuclear GCNF-related
MA2245.1 Hr78 Drosophila melanogaster Nuclear RXR-related
MA2246.1 Jra Drosophila melanogaster Basic Jun-related
MA2247.1 Kah Drosophila melanogaster C2H2 More
MA2248.1 kay Drosophila melanogaster Basic Fos-related
MA2249.1 ken Drosophila melanogaster C2H2 Other
MA2250.1 klu Drosophila melanogaster C2H2 More
MA2251.1 knrl Drosophila melanogaster Nuclear Thyroid
MA2252.1 lmd Drosophila melanogaster C2H2 More
MA2253.1 luna Drosophila melanogaster C2H2 Three-zinc
MA2254.1 lz Drosophila melanogaster Runt Runt-related
MA2255.1 Max Drosophila melanogaster Basic bHLH-ZIP
MA2256.1 mid Drosophila melanogaster T-Box TBX1-related
MA2257.1 Mitf Drosophila melanogaster Basic bHLH-ZIP
MA2258.1 Mnt Drosophila melanogaster Basic bHLH-ZIP
MA2259.1 org-1 Drosophila melanogaster T-Box TBX1-related
MA2260.1 pdm3 Drosophila melanogaster Homeo POU
MA2261.1 phol Drosophila melanogaster C2H2 More
MA2262.1 pnt Drosophila melanogaster Tryptophan Ets-related
MA2263.1 Poxm Drosophila melanogaster Paired Paired
MA2264.1 Rel Drosophila melanogaster Rel NF-kappaB-related
MA2265.1 retn Drosophila melanogaster ARID ARID-related
MA2266.1 Rfx Drosophila melanogaster Fork RFX-related
MA2267.1 rib Drosophila melanogaster C2H2 Other
MA2268.1 sage Drosophila melanogaster Homeo TALE-type
MA2269.1 sc Drosophila melanogaster Basic MyoD/ASC-related
MA2270.1 scrt Drosophila melanogaster C2H2 More
MA2271.1 sens Drosophila melanogaster C2H2 More
MA2272.1 slp2 Drosophila melanogaster Fork FOX
MA2273.1 Sox102F Drosophila melanogaster High-mobility SOX-related
MA2274.1 Sox14 Drosophila melanogaster High-mobility SOX-related
MA2275.1 Sox15 Drosophila melanogaster High-mobility SOX-related
MA2276.1 Sox21a Drosophila melanogaster High-mobility SOX-related
Showing 50 profiles of page 82 from 86 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.