JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0072.2 RORA Homo sapiens Nuclear Thyroid
MA0073.1 RREB1 Homo sapiens C2H2 Factors
MA0073.2 RREB1 Homo sapiens C2H2 Factors
MA0074.1 RXRA::VDR Homo sapiens Nuclear RXR-related::Thyroid
MA0075.1 Prrx2 Mus musculus Homeo Paired-related
MA0075.2 Prrx2 Mus musculus Homeo Paired-related
MA0075.3 PRRX2 Homo sapiens Homeo Paired-related
MA0075.4 PRRX2 Homo sapiens Homeo Paired-related
MA0076.1 ELK4 Homo sapiens Tryptophan Ets-related
MA0076.2 ELK4 Homo sapiens Tryptophan Ets-related
MA0076.3 ELK4 Homo sapiens Tryptophan Ets-related
MA0077.1 SOX9 Homo sapiens High-mobility SOX-related
MA0077.2 SOX9 Homo sapiens High-mobility SOX-related
MA0078.1 Sox17 Mus musculus High-mobility SOX-related
MA0078.2 Sox17 Mus musculus High-mobility SOX-related
MA0078.3 Sox17 Mus musculus High-mobility SOX-related
MA0079.1 SP1 Homo sapiens C2H2 Three-zinc
MA0079.2 SP1 Homo sapiens Mus musculus Rattus norvegicus C2H2 Three-zinc
MA0079.3 SP1 Homo sapiens C2H2 Three-zinc
MA0079.4 SP1 Homo sapiens C2H2 Three-zinc
MA0079.5 SP1 Homo sapiens C2H2 Three-zinc
MA0080.1 SPI1 Homo sapiens Tryptophan Ets-related
MA0080.2 SPI1 Homo sapiens Tryptophan Ets-related
MA0080.3 Spi1 Mus musculus Tryptophan Ets-related
MA0080.4 SPI1 Homo sapiens Tryptophan Ets-related
Showing 25 profiles of page 8 from 172 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.