JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0638.1 CREB3 Homo sapiens Basic CREB-related
MA0638.2 CREB3 Homo sapiens Basic CREB-related
MA0639.1 DBP Homo sapiens Basic CEBP-related
MA0639.2 DBP Homo sapiens Basic CEBP-related
MA0640.1 ELF3 Homo sapiens Tryptophan Ets-related
MA0640.2 ELF3 Homo sapiens Tryptophan Ets-related
MA0640.3 ELF3 Homo sapiens Tryptophan Ets-related
MA0641.1 ELF4 Homo sapiens Tryptophan Ets-related
MA0642.1 EN2 Homo sapiens Homeo NK
MA0642.2 EN2 Homo sapiens Homeo NK
MA0642.3 EN2 Homo sapiens Homeo NK
MA0643.1 Esrrg Mus musculus Nuclear Steroid
MA0643.2 Esrrg Mus musculus Nuclear Steroid
MA0644.1 ESX1 Homo sapiens Homeo Paired-related
MA0644.2 ESX1 Homo sapiens Homeo Paired-related
MA0644.3 ESX1 Homo sapiens Homeo Paired-related
MA0645.1 ETV6 Homo sapiens Tryptophan Ets-related
MA0645.2 ETV6 Homo sapiens Tryptophan Ets-related
MA0646.1 GCM1 Homo sapiens GCM GCM
MA0646.2 GCM1 Homo sapiens GCM GCM
MA0647.1 GRHL1 Homo sapiens Grainyhead Grainyhead-related
MA0647.2 GRHL1 Homo sapiens Grainyhead Grainyhead-related
MA0648.1 GSC Homo sapiens Homeo Paired-related
MA0648.2 GSC Homo sapiens Homeo Paired-related
MA0649.1 HEY2 Homo sapiens Basic Hairy-related
Showing 25 profiles of page 51 from 172 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.