JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA2397.1 ILR3 Arabidopsis thaliana Basic
MA2398.1 AS2 Arabidopsis thaliana Other LBD
MA2399.1 LjSGA_053525.1 NA TCP
MA2400.1 LjTCP20 NA TCP
MA2401.1 Os05g0437700 Oryza sativa Basic
MA2402.1 OsERF104 Oryza sativa AP2/EREBP ERF/DREB
MA2403.1 DVH24_040989 NA Tryptophan Trihelix
MA2404.1 OsTRBF3 Oryza sativa Tryptophan MYB-related
MA2405.1 OsMSL08 Oryza sativa Tryptophan Trihelix
MA2406.1 PK03576.1 Cannabis sativa Basic bHLH
Showing 10 profiles of page 423 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.