JASPAR CORE

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Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0483.1 Gfi1B Mus musculus C2H2 More
MA0483.2 Gfi1B Mus musculus C2H2 More
MA0484.1 HNF4G Homo sapiens Nuclear RXR-related
MA0484.2 HNF4G Homo sapiens Nuclear RXR-related
MA0484.3 HNF4G Homo sapiens Nuclear RXR-related
MA0485.1 Hoxc9 Mus musculus Homeo HOX
MA0485.2 HOXC9 Homo sapiens Homeo HOX
MA0485.3 HOXC9 Homo sapiens Homeo HOX
MA0486.1 HSF1 Homo sapiens Heat HSF
MA0486.2 HSF1 Homo sapiens Heat HSF
MA0488.1 JUN Homo sapiens Basic Jun-related
MA0488.2 JUN Homo sapiens Basic Jun-related
MA0489.1 JUN Homo sapiens Basic Jun-related
MA0489.2 Jun Mus musculus Basic Jun-related
MA0489.3 Jun Mus musculus Basic Jun-related
MA0490.1 JUNB Homo sapiens Basic Jun-related
MA0490.2 JUNB Homo sapiens Basic Jun-related
MA0490.3 JUNB Homo sapiens Basic Jun-related
MA0491.1 JUND Homo sapiens Basic Jun-related
MA0491.2 JUND Homo sapiens Basic Jun-related
MA0491.3 JUND Homo sapiens Basic Jun-related
MA0492.1 JUND Homo sapiens Basic Jun-related
MA0492.2 JUND Homo sapiens Basic Jun-related
MA0493.1 Klf1 Mus musculus C2H2 Three-zinc
MA0493.2 KLF1 Homo sapiens C2H2 Three-zinc
Showing 25 profiles of page 38 from 172 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.