JASPAR CORE

  1. Home
  2. Collection CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0779.2 PAX1 Homo sapiens Paired Paired
MA0780.1 PAX3 Homo sapiens Paired Paired
MA0781.1 PAX9 Homo sapiens Paired Paired
MA0781.2 PAX9 Homo sapiens Paired Paired
MA0782.1 PKNOX1 Homo sapiens Homeo TALE-type
MA0782.2 PKNOX1 Homo sapiens Homeo TALE-type
MA0782.3 PKNOX1 Homo sapiens Homeo TALE-type
MA0783.1 PKNOX2 Homo sapiens Homeo TALE-type
MA0784.1 POU1F1 Homo sapiens Homeo POU
MA0784.2 POU1F1 Homo sapiens Homeo POU
MA0784.3 POU1F1 Homo sapiens Homeo POU
MA0785.1 POU2F1 Homo sapiens Homeo POU
MA0785.2 POU2F1 Homo sapiens Homeo POU
MA0786.1 POU3F1 Homo sapiens Homeo POU
MA0786.2 POU3F1 Homo sapiens Homeo POU
MA0787.1 POU3F2 Homo sapiens Homeo POU
MA0788.1 POU3F3 Homo sapiens Homeo POU
MA0789.1 POU3F4 Homo sapiens Homeo POU
MA0790.1 POU4F1 Homo sapiens Homeo POU
MA0790.2 POU4F1 Homo sapiens Homeo POU
MA0791.1 POU4F3 Homo sapiens Homeo POU
MA0791.2 POU4F3 Homo sapiens Homeo POU
MA0792.1 POU5F1B Homo sapiens Homeo POU
MA0793.1 POU6F2 Homo sapiens Homeo POU
MA0793.2 POU6F2 Homo sapiens Homeo POU
MA0794.1 PROX1 Homo sapiens Homeo HD-PROS
MA0795.1 SMAD3 Homo sapiens SMAD/NF-1 SMAD
MA0796.1 TGIF1 Homo sapiens Homeo TALE-type
MA0797.1 TGIF2 Homo sapiens Homeo TALE-type
MA0798.1 RFX3 Homo sapiens Fork RFX-related
MA0798.2 RFX3 Homo sapiens Fork RFX-related
MA0798.3 RFX3 Homo sapiens Fork RFX-related
MA0799.1 RFX4 Homo sapiens Fork RFX-related
MA0799.2 RFX4 Homo sapiens Fork RFX-related
MA0799.3 RFX4 Homo sapiens Fork RFX-related
MA0800.1 EOMES Homo sapiens T-Box TBrain-related
MA0800.2 EOMES Homo sapiens T-Box TBrain-related
MA0801.1 MGA Homo sapiens T-Box TBX6-related
MA0802.1 TBR1 Homo sapiens T-Box TBrain-related
MA0802.2 TBR1 Homo sapiens T-Box TBrain-related
MA0803.1 TBX15 Homo sapiens T-Box TBX1-related
MA0804.1 TBX19 Homo sapiens T-Box Brachyury-related
MA0804.2 TBX19 Homo sapiens T-Box Brachyury-related
MA0805.1 TBX1 Homo sapiens T-Box TBX1-related
MA0806.1 TBX4 Homo sapiens T-Box TBX2-related
MA0807.1 TBX5 Homo sapiens T-Box TBX2-related
MA0808.1 TEAD3 Homo sapiens TEA TEF-1-related
MA0809.1 TEAD4 Homo sapiens TEA TEF-1-related
MA0809.2 TEAD4 Homo sapiens TEA TEF-1-related
MA0809.3 TEAD4 Homo sapiens TEA TEF-1-related
Showing 50 profiles of page 32 from 86 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.