JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1639.2 MEIS1 Homo sapiens Homeo TALE-type
MA1640.1 MEIS2 Homo sapiens Homeo TALE-type
MA1640.2 MEIS2 Homo sapiens Homeo TALE-type
MA1641.1 MYF5 Homo sapiens Basic MyoD/ASC-related
MA1641.2 MYF5 Homo sapiens Basic MyoD/ASC-related
MA1642.1 NEUROG2 Homo sapiens Basic Tal-related
MA1642.2 NEUROG2 Homo sapiens Basic Tal-related
MA1643.1 NFIB Homo sapiens SMAD/NF-1 Nuclear
MA1643.2 NFIB Homo sapiens SMAD/NF-1 Nuclear
MA1644.1 NFYC Homo sapiens Heteromeric Heteromeric
MA1644.2 NFYC Homo sapiens Heteromeric Heteromeric
MA1645.1 NKX2-2 Homo sapiens Homeo NK
MA1645.2 NKX2-2 Homo sapiens Homeo NK
MA1646.1 OSR2 Homo sapiens C2H2 More
MA1646.2 OSR2 Homo sapiens C2H2 More
MA1647.1 PRDM4 Homo sapiens C2H2 Factors
MA1647.2 Prdm4 Mus musculus C2H2 Factors
MA1647.3 Prdm4 Mus musculus C2H2 Factors
MA1648.1 TCF12 Homo sapiens Basic E2A
MA1648.2 TCF12 Homo sapiens Basic E2A
MA1649.1 ZBTB12 Homo sapiens C2H2 More
MA1649.2 ZBTB12 Homo sapiens C2H2 More
MA1650.1 ZBTB14 Homo sapiens C2H2 More
MA1650.2 ZBTB14 Homo sapiens C2H2 More
MA1651.1 ZFP42 Homo sapiens C2H2 More
Showing 25 profiles of page 125 from 172 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.